Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031123.1 Length=39444 Score E Sequences producing significant alignments: (Bits) Value seq34826 87.8 5e-13 >seq34826 Length=13225 Score = 87.8 bits (96), Expect = 5e-13 Identities = 222/335 (66%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 31370 CGTTGACTCCAGAGGGACTTGCTGCTGCGGTCGATAAGTACGCCAACGATAAGGCTTACG 31429 || |||| | |||| ||| || || ||||| |||||||||||||| ||||| || | Sbjct 5949 CGATGACCACTGAGGAGCTTCAGGCGGCAGTCGAGAAGTACGCCAACGACAAGGCGTATG 5890 Query 31430 GTATCTCTCACACCGAGCAGTTCGAACGCTCATCCG-TAATGGAAGAGAACATCAACGGT 31488 | ||| ||| |||| | ||| | ||| | || | | || ||| || | || | Sbjct 5889 GCATCAGCCACTCCGACCGCTTC-ACGGCTGACTCGCTGGTAGAGGAGCACCTGAAGGAC 5831 Query 31489 CTTGTGGGTCTGGAGAACAACAGCTTCCTTGAGGCTCGTAACCTGTTCGATAGCGATATG 31548 | || |||||||||||| || ||| || ||||||||||| ||||| ||||||| Sbjct 5830 GGGGCAGGCCTGGAGAACAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATG 5771 Query 31549 TCAATCGTTCTGACGAACGGTCAGACGTTCAGTGTCAACAATCTGCGTGAGTGGGACATG 31608 || ||| | | |||| ||| ||||| ||| || | || || || | || || Sbjct 5770 TCGATCACCGCGCCTGACGGCCAGCCGTTCGCTGTGAATGACCTCCGAGACTTCAACCTG 5711 Query 31609 GACAAGATTGTACCGGCCTACAACCGTCGAGTTAATGGTGACATTGCTATCATGGCTGGT 31668 | | || ||| ||| |||| | || || |||||||| || |||||| ||| Sbjct 5710 CTTCGGGTGGTCCCGCAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGC 5651 Query 31669 ACAGGAAAGACCACGAAGGACATGAAGGACTTGGT 31703 || || ||| ||| | | ||||| || |||| Sbjct 5650 ACCGGGAAGGACACCCGGACCCTGAAGAACATGGT 5616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125829309566992