Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq6372 125 1e-23 seq163424 123 4e-23 seq26 89.7 8e-13 seq4 87.8 3e-12 >seq6372 Length=86001 Score = 125 bits (138), Expect = 1e-23 Identities = 149/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 200092 AAGAAAGACCGTACCGGTANNNNNACC-ACGTCTATTTTCGGTGCACAGATGCGCTTCAA 200150 ||| ||||||||||||| | ||| || | | ||||| |||||||| ||| | Sbjct 39810 AAGGAAGACCGTACCGGCACGGGCACCTACAGCG-TGTTCGGCTACCAGATGCGTTTCGA 39752 Query 200151 TCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTCCGTTCCATCATTCA 200210 || || || ||||| | || || |||||||||||||| || || || ||||| || Sbjct 39751 CCTGGCCGATGGTTTCCCCATCGTCACCACCAAGAAGTGCCACCTGCGCTCGATCATCCA 39692 Query 200211 CGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTGAACGATAACAATGT 200270 ||||||| |||||||||| | || |||||||| |||||||| || || || ||| || Sbjct 39691 CGAGCTGCTGTGGTTCCTCCAGGGCGACACCAACATCAAGTACCTCAAGGACAACGGCGT 39632 Query 200271 CACCATTTGGGACGAATGGGC 200291 || ||| |||||||| ||||| Sbjct 39631 CAGCATCTGGGACGAGTGGGC 39611 >seq163424 Length=1083 Score = 123 bits (136), Expect = 4e-23 Identities = 126/164 (77%), Gaps = 3/164 (2%) Strand=Plus/Plus Query 200137 CAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTC 200196 ||||||||||| |||| || ||||| || ||||||| ||||||||||| |||||| Sbjct 795 CAGATGCGCTTTGATCTGGCCGAGGGCTTTCCGCTGGTGACCACCAAGAAGTGTCATCTC 854 Query 200197 CGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTG 200256 |||||||| ||||||||| ||||||| | | || || ||||| ||| ||||||| Sbjct 855 AAGTCCATCATCCACGAGCTGCTGTGGTTTTTGCAGGGCGATACCAACATCCGGTATCTG 914 Query 200257 AACGATAACAATGTCACCATTTGGGACGAATGGGCGCGAGACGA 200300 || || ||| ||| |||| |||||||| ||||| |||||| Sbjct 915 AAGGAAAACGGCGTCTCCATCTGGGACGAGTGGGC---AGACGA 955 >seq26 Length=549101 Score = 89.7 bits (98), Expect = 8e-13 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 200073 CCGTCGCGACGGGCATGTAAAGAAAGACCGTACCGGTANNNNNACCACGTCTATTTTCGG 200132 ||| | ||| || || | |||| ||||| ||||| | ||| || | ||||| Sbjct 240127 CCGCCACGAAGGCCAGTTCAAGAGCGACCGCACCGGCACCGGCACCTACTCGGTGTTCGG 240186 Query 200133 TGCACAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCA 200192 |||||||||||| | || || |||||||| || |||| ||||||||| || Sbjct 240187 CCACCAGATGCGCTTCGACCTGGCCGAAGGCTTCCCGGTGCTGACCACCAAGAAGCTGCA 240246 Query 200193 TCTCCGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTA 200252 || || ||||| ||||| ||| |||||||||| | || |||||||| ||| || Sbjct 240247 CCTGAAGTCGATCATCCACGAACTGCTGTGGTTCCTGCAGGGCGACACCAACATCCGCTA 240306 Query 200253 TCTGAACGATAACAATGTCACCATTTGGGACGAATGGGC 200291 ||||| || || || ||| |||||||| ||||| Sbjct 240307 CCTGAAGGAACACGGCGTGCGCATCTGGGACGAGTGGGC 240345 >seq4 Length=924746 Score = 87.8 bits (96), Expect = 3e-12 Identities = 87/110 (79%), Gaps = 6/110 (5%) Strand=Plus/Minus Query 4062 CATCGGCACTGCCATATCTGGAGAATTGACCGAGAGGCCGAAAGTGCTCCCCTGCTAAGG 4121 ||||| || ||| | || ||||| ||||||||||||||||| ||||||||||||||||| Sbjct 61291 CATCGCCA--GCCTTGTC-GGAGAGTTGACCGAGAGGCCGAAGGTGCTCCCCTGCTAAGG 61235 Query 4122 GAGT---GGTCCTTAGGGGCCCGAAGGTTCGAATCCTTCATTCTCCGCCA 4168 |||| |||| || | | | ||||||||||| | | ||||||||| Sbjct 61234 GAGTAGGGGTCAAAAGCCCCTCAAGGGTTCGAATCCCTTACTCTCCGCCA 61185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 781595129088000