Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq6372 149 2e-31 seq163424 87.8 7e-13 seq11470 86.0 2e-12 >seq6372 Length=86001 Score = 149 bits (164), Expect = 2e-31 Identities = 348/520 (67%), Gaps = 10/520 (2%) Strand=Plus/Minus Query 51810 GGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTCGGGGAGTTGCTG 51869 || ||||| || |||||||||||||| || | | || | || ||| ||||| Sbjct 39741 GGTTTCCCCATCGTCACCACCAAGAAGTGCCACCTGCGCTCGATCATCCACGAGCTGCTG 39682 Query 51870 TGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGCGTCAGCATTTGG 51929 ||||| || |||| || ||| |||| | ||| | | ||||||||||||| ||| Sbjct 39681 TGGTTCCTCCAGGGCGACACCAACATCAAGTACCTCAAGGACAACGGCGTCAGCATCTGG 39622 Query 51930 GACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGGCGTAGT 51989 ||||| ||||| || || || || ||||| || || || || || | |||||||| || Sbjct 39621 GACGAGTGGGCCGACGAGAACGGCAACCTCGGCCCGGTCTACGGCTACCAGTGGCGCAGC 39562 Query 51990 TGGGATGCTGGTGGCGGCAAGGTCATCGATCAGATCCATGAAG-TCGTCAAATCAATTAA 52048 ||| || |||| || |||||| ||||| || ||| | ||| | || Sbjct 39561 TGGCCGGCGCCCAACGGCGAGTCCATCGACCAGAT-CAGCAAGCTGGTCGAGATGATCCG 39503 Query 52049 GAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGTGATTTGGATGA 52108 | | | || || || || | || ||||| || ||||| || | || | Sbjct 39502 CAGCAACCCGGACTCGCGCCGTCTGATCGTCTCGGCCTGGAACCCGGCGCTGGTCGAGCA 39443 Query 52109 TATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTC 52168 |||||| || | ||||| ||| | || ||||| ||||| || || || || ||||| || Sbjct 39442 GATGGCGCTGCCGCCCTGTCATGCGCTGTTCCAGTTCTACGTCGCCGACGGCAAGCTGTC 39383 Query 52169 GTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAG 52228 ||||| | || ||||| || || ||||| ||| | ||||| || || ||||| ||||| Sbjct 39382 CTGCCAGCTCTACCAGCGCTCGGCGGACATCTTCCTCGGCGTGCCCTTCAACATCGCCAG 39323 Query 52229 CTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGTT----GGCCTTGATGTTGGTGAAT 52284 ||| || |||||||| |||| || | | |||| | ||||| | || || | Sbjct 39322 CTACGCCCTGCTGACG---CTGA-TGGTGGCGCAGGTCTGCGGCCTGCAGCCGGGCGAGT 39267 Query 52285 TCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCA 52324 |||| ||||| || || ||| ||| | ||| |||||| Sbjct 39266 TCATCTGGACCGGCGGTGACTGCCACCTGTACGCCAACCA 39227 >seq163424 Length=1083 Score = 87.8 bits (96), Expect = 7e-13 Identities = 133/189 (70%), Gaps = 8/189 (4%) Strand=Plus/Plus Query 51808 AGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTC----CCATCAGTGGTCGGGGAG 51863 ||||||| ||||| | |||||||||||| ||| || |||||| || ||| Sbjct 817 AGGGCTTTCCGCTGGTGACCACCAAGAAGTGTCATCTCAAGTCCATCA----TCCACGAG 872 Query 51864 TTGCTGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGCGTCAGC 51923 |||||||||| | |||| ||| ||| || |||| | | |||||||| | Sbjct 873 CTGCTGTGGTTTTTGCAGGGCGATACCAACATCCGGTATCTGAAGGAAAACGGCGTCTCC 932 Query 51924 ATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGG 51983 || |||||||| ||||| || || ||||| ||||||| || || ||||| | |||||| Sbjct 933 ATCTGGGACGAGTGGGCAGACGAGAATGGCGACCTGGGGCCGGTCTATGGCTATCAGTGG 992 Query 51984 CGTAGTTGG 51992 || || ||| Sbjct 993 CGCAGCTGG 1001 >seq11470 Length=53368 Score = 86.0 bits (94), Expect = 2e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 52122 CCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTAT 52181 || || ||||| || |||||||| | ||| ||| || || || ||||| | ||| Sbjct 34460 CCTTGTCATACCCTGTTCCAATTTTTTGTGCATGATAACAAACTCTCTTGCCAACTTTAT 34401 Query 52182 CAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTG 52241 || || ||| || | || || || || || ||||| ||||| |||||| || | || Sbjct 34400 CAACGTAGTGCAGATGTATTTTTAGGTGTGCCATTTAATATTGCTAGCTATGCCCTACTC 34341 Query 52242 ACGCATCTGATTGCTCGAGCAGTTGGCCTTGATGTTGGTGAATTCATTTGGACTGGTGGC 52301 || ||| ||||||| | || ||| | |||||||| || || ||||||||||||| Sbjct 34340 ACCCATATGATTGCACAAGTCTGTGGTTTAGATGTTGGGGACTTTGTTTGGACTGGTGGT 34281 Query 52302 GA 52303 || Sbjct 34280 GA 34279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189689137055960