Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq12585 87.8 1e-12 >seq12585 Length=48618 Score = 87.8 bits (96), Expect = 1e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 46307 TGCCATTCATCTACCCCCACGTTGCGCTGATGCCAGATGCTCACGCAGGCAAGGGGTCTG 46366 |||| ||||||| | ||| | ||| ||||||| || | ||| || ||||| || Sbjct 44301 TGCCGTTCATCTTCAAGCACCTGGCGGTGATGCCGGACGTGCACCTGGGTAAGGGCTCGA 44242 Query 46367 CCGTGGGCACGGTGATCCCCACCAAGGACGCCGTCATCCCAGCGGCCGTGGGTGTCGACA 46426 || | |||| ||||||||||| | ||| | ||||| |||||||| ||||| || | Sbjct 44241 CCATCGGCAGCGTGATCCCCACGGTCGGCGCGATTATCCCGGCGGCCGTTGGTGTGGATA 44182 Query 46427 TCGGTTGCGGGATGATCGGCG 46447 |||||||||| ||||||| || Sbjct 44181 TCGGTTGCGGCATGATCGCCG 44161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313220856175212