Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq71469 95.1 2e-14 seq131746 89.7 6e-13 seq36072 87.8 2e-12 seq29690 87.8 2e-12 seq19269 87.8 2e-12 seq128 87.8 2e-12 seq100 87.8 2e-12 seq5373 86.0 8e-12 seq7 86.0 8e-12 seq47879 84.2 3e-11 seq68 82.4 9e-11 >seq71469 Length=5065 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 19649 GGGGAATTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGCTGTCAGGAGTTCGAGT 19708 ||||| |||||| |||||||||||| ||||||||||| ||||| ||||||||||||| | Sbjct 4986 GGGGACTTAGCTTAGTTGGTAGAGCGCCTGCTTTGCACGCAGGAGGTCAGGAGTTCGACT 4927 Query 19709 CTCCTATTCTCC 19720 |||||| ||||| Sbjct 4926 CTCCTAGTCTCC 4915 >seq131746 Length=1327 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19746 CATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCG 19805 ||||| | ||||||||||||||||||||| ||||||||||| | |||||||||||| Sbjct 315 CATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCG 374 Query 19806 AGCCCAGGTGGAGGAGC 19822 ||||||||||| |||| Sbjct 375 AGCCCAGGTGGGAGAGC 391 >seq36072 Length=12768 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806 |||| | ||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct 12768 ATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 12709 Query 19807 GCCCAGGTGGAGGAGC 19822 |||||||||| |||| Sbjct 12708 GCCCAGGTGGGAGAGC 12693 >seq29690 Length=17010 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806 |||| | ||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct 169 ATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 110 Query 19807 GCCCAGGTGGAGGAGC 19822 |||||||||| |||| Sbjct 109 GCCCAGGTGGGAGAGC 94 >seq19269 Length=29301 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806 |||| | ||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct 29295 ATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 29236 Query 19807 GCCCAGGTGGAGGAGC 19822 |||||||||| |||| Sbjct 29235 GCCCAGGTGGGAGAGC 29220 >seq128 Length=380166 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806 |||| | ||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct 179236 ATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 179295 Query 19807 GCCCAGGTGGAGGAGC 19822 |||||||||| |||| Sbjct 179296 GCCCAGGTGGGAGAGC 179311 >seq100 Length=411593 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806 |||| | ||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct 268042 ATTCTCCCATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 267983 Query 19807 GCCCAGGTGGAGGAGC 19822 |||||||||| |||| Sbjct 267982 GCCCAGGTGGGAGAGC 267967 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806 |||| | ||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct 268313 ATTCTCCAATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 268254 Query 19807 GCCCAGGTGGAGGAGC 19822 |||||||||| |||| Sbjct 268253 GCCCAGGTGGGAGAGC 268238 >seq5373 Length=95907 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 165786 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 165845 ||||||||||||||||||||| | ||||||||||| | |||||||||||||| |||||| Sbjct 62152 GTAGCTCAGTTGGATAGAGCATCCGCCTTCTAAGCGGATGGTCACAGGTTCGAATCCTGT 62093 Query 165846 CTGACCCGCC 165855 | | | |||| Sbjct 62092 CAGGCGCGCC 62083 >seq7 Length=747525 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 165786 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTCCTGT 165845 ||||||||||||||||||||||| ||||||||||| || ||||| |||||||| |||| | Sbjct 439912 GTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCATAGGTTCGAATCCTAT 439853 Query 165846 CTGACCCGCC 165855 | | | |||| Sbjct 439852 CGGGCGCGCC 439843 >seq47879 Length=8720 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 19747 ATTCCTCTATAGCTCAGTCGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19806 |||| | ||||||||||||||||||||| ||||||||||| | ||||||||||||| Sbjct 78 ATTCTCCAATAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCGCAGGTCCCTGGTTCGA 19 Query 19807 GCCCAGG-TGGAG 19818 ||||||| ||||| Sbjct 18 GCCCAGGTTGGAG 6 >seq68 Length=444459 Score = 82.4 bits (90), Expect = 9e-11 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 165780 GGGTCAGTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAG 165839 ||| | ||||||||||||| ||||||||||| ||| ||| |||| |||||||||||||| Sbjct 414100 GGGCCCGTAGCTCAGTTGG-TAGAGCAACTGACTTTTAATCAGTGGGTCACAGGTTCGAA 414158 Query 165840 TCCTGTC 165846 ||||||| Sbjct 414159 TCCTGTC 414165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620668906492320