Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031258.1 Length=39696 Score E Sequences producing significant alignments: (Bits) Value seq34826 122 2e-23 >seq34826 Length=13225 Score = 122 bits (134), Expect = 2e-23 Identities = 133/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 31817 GAGAACAACTCGTTCCTTGAAGCCCGTAACCTGTTCGACTCTGACATGCCCGTCACCCTG 31876 ||||||||| | ||| ||||| |||||||| |||||||| || ||| | ||||| | Sbjct 5818 GAGAACAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCG 5759 Query 31877 CCTAATGGACAGCCGTTCTCTGTGAATGACCTCCGTGACTTCGATATGAAGCGTGTGATG 31936 ||| | || ||||||||| |||||||||||||||| |||||| | || || ||| | Sbjct 5758 CCTGACGGCCAGCCGTTCGCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGTC 5699 Query 31937 CCAGCCTATGACCGCCGTGTTGATGGTGATATTGCTATCATGGGTGGTACAGGGAAG 31993 || || |||||| | || | ||||| || || |||||||||| || |||||| Sbjct 5698 CCGCAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCGGGAAG 5642 Score = 98.7 bits (108), Expect = 3e-16 Identities = 175/255 (69%), Gaps = 8/255 (3%) Strand=Plus/Minus Query 29654 GAGTCCCGGTTTAACCCAAAGGCTGTGTCCCCTACGAAACCTCGTGGTGTCATGCAGTTC 29713 || ||| ||| ||||| || || ||| ||||||| ||||| ||| || ||||||| Sbjct 8041 GAATCCTCGTTCAACCCTAAAGCCGTGAGCCCTACGGGGCCTCGCGGTATCGGGCAGTTC 7982 Query 29714 ACTAAGGCAACCGGACAGGCGTATGGTCTTCAGACTGATGAGGACTTCTTCGACCCAGCT 29773 || ||||| || || | || || || || || || ||||||||||||||||| || Sbjct 7981 ACCAAGGCCACTGGGAAAGCCTACGGCCTGATCACCGAGGAGGACTTCTTCGACCCCGCC 7922 Query 29774 AAGTCTATTGATGCTGGTGCTCGTTACCTTGCAGACCTCGTTAAGAAGTACGATGGTGAC 29833 ||||| || || || | ||||| || | ||| | | ||| || | | || ||| Sbjct 7921 AAGTCCATCGACGCAGCCGCTCGGCACATGCGCGACAACCTCAAGGCGTCCAACGGCGAC 7862 Query 29834 GAACTGAAAGCTGCCCTAGCGTACAACCAAGGTGAAGGACGTAATGGTAAGCCACAA--- 29890 || ||||| || ||| |||||||||||| | || | ||| ||| ||| Sbjct 7861 GAGCTGAAGGCGCTCCTGATGTACAACCAAGGGGCTGGCC----CGGTGGGCCGCAAGCA 7806 Query 29891 -CTCGAAGCCTACGA 29904 |||||||||||||| Sbjct 7805 GCTCGAAGCCTACGA 7791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126633983627056