Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031269.1 Length=51884 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 5e-14 >seq1 Length=1655743 Score = 91.5 bits (100), Expect = 5e-14 Identities = 145/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 3474 CCCGGCGGCGACGTGTACGACGCGCTGGCCATCACCAACGCGCT---GCGCAATCACGAC 3530 ||||||||| || | ||||||| | || ||| ||| ||| | |||| ||||| Sbjct 161215 CCCGGCGGCTCGGTCTTCGACGCGGTCGCGATCCACAATGCGATCAAGCGC---CACGAG 161159 Query 3531 GCGACGGTGACGGTGCAGGTCGACAGCCTCGCCGCCAGCGCAGCCAGCTTCATCGCGATG 3590 | ||||| ||||| | ||||| | |||||||| || ||| || |||||||||| Sbjct 161158 GGCACGGTCACGGTCTGGATCGACGGTATCGCCGCCTCGGCCGCCTCCTACATCGCGATG 161099 Query 3591 GCCGGCGACGAGGTCGTGATGTGCCGCAACTCCGAGCTGATGATCCACGACGCCCGCGGC 3650 || ||||||||| |||| ||| | ||| || ||||||||||||||| | |||| Sbjct 161098 GCGGGCGACGAGATCGTCATGCCCGAGAACGCCTTCCTGATGATCCACGACCCGTCCGGC 161039 Query 3651 TTCTGCATCGGCAGCGCCACCGACATG 3677 || || |||| ||| |||||| Sbjct 161038 CTCGTGATGGGCACGGCCGAGGACATG 161012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 165552108405072