Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq11470 172 4e-38 seq21230 158 8e-34 seq5373 89.7 3e-13 >seq11470 Length=53368 Score = 172 bits (190), Expect = 4e-38 Identities = 215/295 (73%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 70271 GGTATTGATCAGATCGAGTGGGTAATTAATGAGATTAAAACTAATCCAAATAGCCGTCGT 70330 ||| |||| || || | ||| | | ||||| || ||||| ||||| ||| ||||| Sbjct 34571 GGTTTTGACCAAATTAAATGGCTCGTCAATGAAATCAAAACCAATCCGAATTCACGTCGC 34512 Query 70331 ATGATTGTCACGGGGTGGAACCCTCATGAGATTGAAGATGTAGACCTTCCACCATGTCAT 70390 | || || |||| ||||| || |||| | | || | | ||||| |||||| Sbjct 34511 TTAATCGTTTCGGGCTGGAATCCAAATGAAGCAGGTAAGGTTGCTTTACCACCTTGTCAT 34452 Query 70391 ACACTATTCCAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCCAGCTATATCAACGTAGT 70450 || || |||||||| |||||| | ||| || || |||||||| || |||||||||||| Sbjct 34451 ACCCTGTTCCAATTTTTTGTGCATGATAACAAACTCTCTTGCCAACTTTATCAACGTAGT 34392 Query 70451 GCTGACATTTTACTTGGTGTGCCATTCAATATTGCATCATATGCCTTACTTACACATCTT 70510 || || | || | ||||||||||| |||||||| |||||| |||| || ||| | Sbjct 34391 GCAGATGTATTTTTAGGTGTGCCATTTAATATTGCTAGCTATGCCCTACTCACCCATATG 34332 Query 70511 ATTGCTGCTGAGTGTGGGTTAGGTGTTGGTGAGTTTGTTTGGACTGGTGGTGATA 70565 ||||| | ||||| |||| |||||| || |||||||||||||||||||||| Sbjct 34331 ATTGCACAAGTCTGTGGTTTAGATGTTGGGGACTTTGTTTGGACTGGTGGTGATA 34277 >seq21230 Length=25512 Score = 158 bits (174), Expect = 8e-34 Identities = 224/315 (71%), Gaps = 0/315 (0%) Strand=Plus/Minus Query 70277 GATCAGATCGAGTGGGTAATTAATGAGATTAAAACTAATCCAAATAGCCGTCGTATGATT 70336 ||||| ||| | ||| | || ||||| || || || ||||| ||| |||||| | || Sbjct 8833 GATCAAATCAAATGGCTTATCAATGAAATCAAGACCAATCCCAATTCACGTCGTCTAATC 8774 Query 70337 GTCACGGGGTGGAACCCTCATGAGATTGAAGATGTAGACCTTCCACCATGTCATACACTA 70396 || | || ||||||||| |||| | | || | | || || || ||||| | Sbjct 8773 GTTTCTGGTTGGAACCCTAATGAAGCAGGTAAAGTGGCATTACCGCCTTGCCATACGTTG 8714 Query 70397 TTCCAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCCAGCTATATCAACGTAGTGCTGAC 70456 ||||||||||| || |||| ||| || || ||||| || |||||||| |||||||| Sbjct 8713 TTCCAATTCTTCGTACAAGACAATAAACTCTCATGCCAACTGTATCAACGCAGTGCTGAT 8654 Query 70457 ATTTTACTTGGTGTGCCATTCAATATTGCATCATATGCCTTACTTACACATCTTATTGCT 70516 | || || ||||| ||||| |||||||| |||||| ||||||| ||| | ||||| Sbjct 8653 GTATTCCTAGGTGTTCCATTTAATATTGCGAGTTATGCCCTACTTACGCATATGATTGCG 8594 Query 70517 GCTGAGTGTGGGTTAGGTGTTGGTGAGTTTGTTTGGACTGGTGGTGATATCCATGTGTAC 70576 | ||||| || ||||||||||| ||||| ||||| || || |||| ||| | || Sbjct 8593 CAAGTATGTGGTTTGGGTGTTGGTGACTTTGTCTGGACAGGCGGCGATACACATTTATAT 8534 Query 70577 TCGAATCAATATGAA 70591 | || || | |||| Sbjct 8533 GCCAACCATTTTGAA 8519 >seq5373 Length=95907 Score = 89.7 bits (98), Expect = 3e-13 Identities = 67/79 (85%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 7852 CGCCATTAGCTCAGATGGATAGAGCATCTGCCTTCTAAGTAGATGGTCACGGGTTCGAAT 7911 |||| |||||||| ||||||||||||| |||||||||| ||||||||| ||||||||| Sbjct 62157 CGCCTGTAGCTCAGTTGGATAGAGCATCCGCCTTCTAAGCGGATGGTCACAGGTTCGAAT 62098 Query 7912 CCTGTATGGCGTACCAATT 7930 ||||| |||| ||| || Sbjct 62097 CCTGTCAGGCGCGCCATTT 62079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334837268464132