Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031902.1 Length=125114 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 seq96199 125 6e-24 >seq5 Length=869209 Score = 140 bits (154), Expect = 3e-28 Identities = 222/316 (70%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 52700 ATGGGTATGCATACACGGACGTAGGCATCCTTTACGAAATTCCCCAGGGTTCCAAAAAGT 52759 ||||||||||||||| || || || || || ||| || |||||||| |||| || Sbjct 100360 ATGGGTATGCATACAGGGCCGCAGACAACCAAGTTCAAACTCACCAGGGTTATAAAAGGT 100301 Query 52760 TAAAATTTCTCCACGATCGTCAATCCCTCTTTTCAAATTA-TGATAGACTTTGGCTAACT 52818 | || || |||||||||| ||||| | ||| || ||| || ||| || | | Sbjct 100300 CAGGATCTCGGCACGATCGTCGATCCCCTTGCTCAGGTTGCTGAC-GATTTTTGCCAGTT 100242 Query 52819 GATCAAATACCATACCATCAGAATTAGTCCAATGACGTCCTTGAACACCATAGACTCGTC 52878 |||| || ||||| | || |||| | || ||||| |||||||| || || | Sbjct 100241 GATCTAAAGTTGAGCCATCGGGCTTCTGCCAACGCCGGCCTTGCACACCATATACCCGGC 100182 Query 52879 CCATATCATCCTCGCCTTTACGGAATGGATTACCTAGCCAGGCAATATTTTCATTTGCAT 52938 |||||||||| || || ||||| || ||| ||| |||||| |||||| || |||| Sbjct 100181 CCATATCATCTTCACCCTTACGATGCGGGTTATCTAACCAGGCCTGATTTTCGTTGGCAT 100122 Query 52939 TAGCATTCCATGTATTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCGTACCCACGGA 52998 | |||||||| |||||| ||| ||||| ||||||||||| || ||| || || | | Sbjct 100121 TCGCATTCCAGGTATTACAACCGATAGCACGGAATTGTGCGGCACTGTCATAACCCCTTA 100062 Query 52999 GATATCCGATCATTTC 53014 ||||| | || ||| Sbjct 100061 AGTATCCTAACAATTC 100046 >seq96199 Length=2664 Score = 125 bits (138), Expect = 6e-24 Identities = 234/341 (69%), Gaps = 2/341 (1%) Strand=Plus/Minus Query 52666 TTAGGTATAGTGTATCACCTAAAATAGAGAATTGATGGGTATGCATACACGGACGTAGGC 52725 ||| ||||| ||||| || || | ||| || || || |||||||| || |||| | Sbjct 2287 TTAAGTATAAAGTATCGCCCAACAAAGAAAAGGTGTGCGTGTGCATACAAGGGCGTAAAC 2228 Query 52726 ATCCTTTACGAAATTCCCCAGGGTTCCAAAAAGTTAAAATTTCTCCACGATCGTCAATCC 52785 | ||| |||||| || || || ||||||| | ||||| || ||||| ||||| | Sbjct 2227 AACCTAGCTCAAATTCACCTGGATTATAAAAAGTGACGATTTCACCGCGATCATCAATTC 2168 Query 52786 CTCTTTTCAAATTAT-GATAGACTTTGGCTAACTGATCAAATACCATACCATCAGAATTA 52844 || | || |||| |||| ||||| | |||||||| ||||||||| Sbjct 2167 CTTTCGATAAGTTATCGATA-ACTTTTTTAAGCTGATCAAGGTGGCTACCATCAGGGCGT 2109 Query 52845 GTCCAATGACGTCCTTGAACACCATAGACTCGTCCCATATCATCCTCGCCTTTACGGAAT 52904 |||| || |||||||||||||| || || |||||||||||||| || |||| Sbjct 2108 TGCCAACTGCGCCCTTGAACACCATACACACGGCCCATATCATCCTCACCACTACGATGC 2049 Query 52905 GGATTACCTAGCCAGGCAATATTTTCATTTGCATTAGCATTCCATGTATTAACACCAATA 52964 ||||| | ||||| || | || || || || || |||||||| || || || ||| Sbjct 2048 GGATTTTCAAGCCACGCTTTGTTCTCGTTCGCGTTGGCATTCCAAGTCATACAGCCGATA 1989 Query 52965 GCGCGGAATTGTGCTGCTGAGTCGTACCCACGGAGATATCC 53005 | || || ||||| || |||||| ||||| | ||| || Sbjct 1988 TCACGAAACTGTGCAGCGCTGTCGTAACCACGTAAATAACC 1948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399360822309700