Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031928.1 Length=169936 Score E Sequences producing significant alignments: (Bits) Value seq5 134 1e-26 >seq5 Length=869209 Score = 134 bits (148), Expect = 1e-26 Identities = 281/419 (67%), Gaps = 0/419 (0%) Strand=Plus/Minus Query 143367 CATCAGGTCGTTCAACTGGATTCCATAGTCCATATGACGAATACGGTTCTCATCGACACC 143426 ||||||| ||| ||||| | |||||||||| ||| | | |||||||| || ||||| Sbjct 711172 CATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACC 711113 Query 143427 CTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 143486 ||| |||||||| || ||||| ||| ||||||| |||||| | || || | Sbjct 711112 GCGGTTATTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAG 711053 Query 143487 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 143546 || || || || ||||| | || ||||| || || ||| || || ||||||||||| Sbjct 711052 GGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATG 710993 Query 143547 TTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTC 143606 || | || || ||| || ||||| | ||||||| | | || | |||| Sbjct 710992 CTTATAAAACGGGATACAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAA 710933 Query 143607 AGCACGAATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTAT 143666 ||| ||||| || |||| ||||||||||| || || | || | ||||| | || Sbjct 710932 AGCGCGAATACGGCCTGCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAAT 710873 Query 143667 TGAGTTAGCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGA 143726 | | | || || || || | ||| ||| || ||||| | || || || Sbjct 710872 GGCACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGA 710813 Query 143727 ACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAACCT 143785 || || ||||||||||| ||||| | || | ||||||||| || || | ||||| || Sbjct 710812 GCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542442344981760