Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031933.1 Length=114180 Score E Sequences producing significant alignments: (Bits) Value seq5 140 2e-28 seq96199 125 5e-24 >seq5 Length=869209 Score = 140 bits (154), Expect = 2e-28 Identities = 222/316 (70%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 51811 ATGGGTATGCATACACGGACGTAGGCATCCTTTACGAAATTCCCCAGGGTTCCAAAAAGT 51870 ||||||||||||||| || || || || || ||| || |||||||| |||| || Sbjct 100360 ATGGGTATGCATACAGGGCCGCAGACAACCAAGTTCAAACTCACCAGGGTTATAAAAGGT 100301 Query 51871 TAAAATTTCTCCACGATCGTCAATCCCTCTTTTCAAATTA-TGATAGACTTTGGCTAACT 51929 | || || |||||||||| ||||| | ||| || ||| || ||| || | | Sbjct 100300 CAGGATCTCGGCACGATCGTCGATCCCCTTGCTCAGGTTGCTGAC-GATTTTTGCCAGTT 100242 Query 51930 GATCAAATACCATACCATCAGAATTAGTCCAATGACGTCCTTGAACACCATAGACTCGTC 51989 |||| || ||||| | || |||| | || ||||| |||||||| || || | Sbjct 100241 GATCTAAAGTTGAGCCATCGGGCTTCTGCCAACGCCGGCCTTGCACACCATATACCCGGC 100182 Query 51990 CCATATCATCCTCGCCTTTACGGAATGGATTACCTAGCCAGGCAATATTTTCATTTGCAT 52049 |||||||||| || || ||||| || ||| ||| |||||| |||||| || |||| Sbjct 100181 CCATATCATCTTCACCCTTACGATGCGGGTTATCTAACCAGGCCTGATTTTCGTTGGCAT 100122 Query 52050 TAGCATTCCATGTATTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCGTACCCACGGA 52109 | |||||||| |||||| ||| ||||| ||||||||||| || ||| || || | | Sbjct 100121 TCGCATTCCAGGTATTACAACCGATAGCACGGAATTGTGCGGCACTGTCATAACCCCTTA 100062 Query 52110 GATATCCGATCATTTC 52125 ||||| | || ||| Sbjct 100061 AGTATCCTAACAATTC 100046 >seq96199 Length=2664 Score = 125 bits (138), Expect = 5e-24 Identities = 234/341 (69%), Gaps = 2/341 (1%) Strand=Plus/Minus Query 51777 TTAGGTATAGTGTATCACCTAAAATAGAGAATTGATGGGTATGCATACACGGACGTAGGC 51836 ||| ||||| ||||| || || | ||| || || || |||||||| || |||| | Sbjct 2287 TTAAGTATAAAGTATCGCCCAACAAAGAAAAGGTGTGCGTGTGCATACAAGGGCGTAAAC 2228 Query 51837 ATCCTTTACGAAATTCCCCAGGGTTCCAAAAAGTTAAAATTTCTCCACGATCGTCAATCC 51896 | ||| |||||| || || || ||||||| | ||||| || ||||| ||||| | Sbjct 2227 AACCTAGCTCAAATTCACCTGGATTATAAAAAGTGACGATTTCACCGCGATCATCAATTC 2168 Query 51897 CTCTTTTCAAATTAT-GATAGACTTTGGCTAACTGATCAAATACCATACCATCAGAATTA 51955 || | || |||| |||| ||||| | |||||||| ||||||||| Sbjct 2167 CTTTCGATAAGTTATCGATA-ACTTTTTTAAGCTGATCAAGGTGGCTACCATCAGGGCGT 2109 Query 51956 GTCCAATGACGTCCTTGAACACCATAGACTCGTCCCATATCATCCTCGCCTTTACGGAAT 52015 |||| || |||||||||||||| || || |||||||||||||| || |||| Sbjct 2108 TGCCAACTGCGCCCTTGAACACCATACACACGGCCCATATCATCCTCACCACTACGATGC 2049 Query 52016 GGATTACCTAGCCAGGCAATATTTTCATTTGCATTAGCATTCCATGTATTAACACCAATA 52075 ||||| | ||||| || | || || || || || |||||||| || || || ||| Sbjct 2048 GGATTTTCAAGCCACGCTTTGTTCTCGTTCGCGTTGGCATTCCAAGTCATACAGCCGATA 1989 Query 52076 GCGCGGAATTGTGCTGCTGAGTCGTACCCACGGAGATATCC 52116 | || || ||||| || |||||| ||||| | ||| || Sbjct 1988 TCACGAAACTGTGCAGCGCTGTCGTAACCACGTAAATAACC 1948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 364448879626236