Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031937.1 Length=38979 Score E Sequences producing significant alignments: (Bits) Value seq34826 100 7e-17 >seq34826 Length=13225 Score = 100 bits (110), Expect = 7e-17 Identities = 216/322 (67%), Gaps = 1/322 (0%) Strand=Plus/Minus Query 31258 AGGA-CTTGCGGCTGCGGTCGATAAGTACGCCAACGATAAGGCTTATGGTATCTCTCACA 31316 |||| ||| ||| || ||||| |||||||||||||| ||||| ||||| ||| ||| Sbjct 5937 AGGAGCTTCAGGCGGCAGTCGAGAAGTACGCCAACGACAAGGCGTATGGCATCAGCCACT 5878 Query 31317 CCGAGCAGTTCGAGCGTTCATCCGTAATGGAAGAGAACATCAATGGTCTGGTGGGTCTGG 31376 |||| | ||| | | || | | || ||| || | || | || || |||| Sbjct 5877 CCGACCGCTTCACGGCTGACTCGCTGGTAGAGGAGCACCTGAAGGACGGGGCAGGCCTGG 5818 Query 31377 AGAACAACAGCTTCCTTGAGGCTCGTAACCTGTTCGATAGCGATATGTCAATCGTCCTAC 31436 |||||||| || ||| || ||||||||||| ||||| ||||||||| ||| | | Sbjct 5817 AGAACAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCGC 5758 Query 31437 CTAACGGTCAGACCTTCAGTGTCAACAACCTGCGTGAGTGGGACATGGACAAGATTGTCC 31496 || |||| ||| | ||| ||| || |||| || || | || || | | |||| Sbjct 5757 CTGACGGCCAGCCGTTCGCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGTCC 5698 Query 31497 CGGCCTACAACCGTCGAGTTAATGGCGATATTGCTATCATGGCTGGTACAGGCAAGACCA 31556 || ||| |||| | || || || || || || |||||| ||| || || ||| || Sbjct 5697 CGCAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCGGGAAGGACA 5638 Query 31557 CGAAGGACATGAAGGACTTGGT 31578 | | | ||||| || |||| Sbjct 5637 CCCGGACCCTGAAGAACATGGT 5616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124344494337112