Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031943.1 Length=40470 Score E Sequences producing significant alignments: (Bits) Value seq34826 120 8e-23 >seq34826 Length=13225 Score = 120 bits (132), Expect = 8e-23 Identities = 205/296 (69%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 32919 AGGA-CTTGCGGCTGCGGTAGATAAGTACGCCAACGATAAGGCTTACGGTATCTCTCACA 32977 |||| ||| ||| || || || |||||||||||||| ||||| || || ||| ||| Sbjct 5937 AGGAGCTTCAGGCGGCAGTCGAGAAGTACGCCAACGACAAGGCGTATGGCATCAGCCACT 5878 Query 32978 CCGACATGTTTGAGCGTTCGTCCGTAATGGAAGAGAACATCAACGGTCTGGTTGGTCTGG 33037 ||||| || | | || | | || ||| || | || | || || |||| Sbjct 5877 CCGACCGCTTCACGGCTGACTCGCTGGTAGAGGAGCACCTGAAGGACGGGGCAGGCCTGG 5818 Query 33038 AGAACAACAACTTCCTTGAGGCCCGTAACCTGTTCGATAGCGATATGTCTATCATCCTCC 33097 |||||||| ||| ||| || || |||||||| ||||| ||||||||| |||| | | Sbjct 5817 AGAACAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCGC 5758 Query 33098 CAAACGGTCAGCCGTTCAACGTGAACAGCCTGCGTGAGTGGGACATGGACAAGATTGTCC 33157 | |||| ||||||||| ||||| ||| || || | || || | | |||| Sbjct 5757 CTGACGGCCAGCCGTTCGCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGTCC 5698 Query 33158 CGGCGTACAACCGTCGAGTCAACGGCGACATCGCTATCATGGCTGGCACCGGAAAG 33213 || |||| |||| | |||||||| |||||||| |||||| ||||||||| ||| Sbjct 5697 CGCAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCGGGAAG 5642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129105482525824