Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq18050 255 6e-63 seq38288 237 2e-57 seq4663 190 2e-43 seq77092 125 7e-24 seq5663 113 5e-20 seq76486 105 7e-18 >seq18050 Length=32055 Score = 255 bits (282), Expect = 6e-63 Identities = 590/883 (67%), Gaps = 16/883 (2%) Strand=Plus/Plus Query 23217 TTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATT 23276 ||| || |||||||| |||||| ||| ||| |||| || || || || || ||| Sbjct 11575 TTTCTGGTATTCCCCGACACGTTTTTAAAAACAATTGGTTTTTCCTTCCAAACTAATACA 11634 Query 23277 TTCCATAAAA-TCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTA 23335 ||||| |||| ||||| || || | |||| | | ||| |||||| | Sbjct 11635 TTCCAAAAAAATCAAAAGGGTTTTCCACAATATAAATTTTATCACACCCCAATTCCCACA 11694 Query 23336 AAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTA 23395 | | | ||||| ||||||||||||||||| ||||| | | || || || || | Sbjct 11695 ATAATCGGTCTGCCACAAATTCAATATATTGCTTTATCAATGTACAATTCATGCCAATGA 11754 Query 23396 GTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTA 23455 | |||||| | || || ||| ||| || ||||| | || |||| || | Sbjct 11755 GGGATACTGGTAATGCCTCGGTTAAAAATTCTTGCTCAATCGTTACGGCATACGATATAA 11814 Query 23456 TTTGAACAATA-ACTTCTTCACTAGGTGGATATTTTA---AATACTTAAACAATAAACAT 23511 |||| ||||| | | ||| | | | | ||||| ||| || ||||| ||| Sbjct 11815 TTTGCACAATTTAATGCTTAGATGATTTGTT-TTTTACGTAATGATTGAACAAGTGACAG 11873 Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571 | |||||| || ||||| |||||||| | ||||||||| || || ||| ||||||| Sbjct 11874 GAAAAATCGCAGTGTAGCCCTTCATCTCGACTAATCAACTCGTTGCTAAACGTTAATCAA 11933 Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631 ||||||||||| ||||| || | |||||| || || ||||| || || || || | || Sbjct 11934 GGCATTAATCCCCGTTTCTTTAACCAAAAAATGGCCGCAAAGGAACCTGAGAAAAGGATT 11993 Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691 || || ||||| ||||||||||| || ||| | ||| | | || | ||| Sbjct 11994 CCTTCCACAGCGGCAAAGGCCACCAGCCGTTTTGGAAAAGACGGGTTTTGT------ATC 12047 Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAG 23751 || ||| || ||| | ||||| || || || || |||||||| || || || Sbjct 12048 CAATTTAATGACCATTCTGCCTTTTTCTTAACGCAGGAAAGGGTTTCAATGGCGTTAAAC 12107 Query 23752 AGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCA 23811 | | ||||||||| || |||| | || ||||| | || || |||||||| Sbjct 12108 AATGTATTTTTTTCTTGATGATCTCGAACGAGGGTCTCAATCAACAAGCTGTACATTTCT 12167 Query 23812 GAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGA 23871 ||||||||||||||||| ||||||||||| ||||||| || | ||| || || || Sbjct 12168 GAATGAATATTTTCAATGGCAATCTGAAAGTCATAAAAGCAACGAGCCTCGATCACTTTT 12227 Query 23872 ACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAG 23931 || ||| | ||| | || |||||||||| || |||||||| ||||| || ||||| Sbjct 12228 ACTTCACGAGCAAAGCGTTCCACTAAATTTTCATTTACAATACCTTCACTGGCGGCAAA- 12286 Query 23932 AAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTA 23991 || || | ||||| | |||| | | |||||| | | |||| ||||||||| | Sbjct 12287 AAGGCCAAAACATGAGAAAGAAAACGCCGTTCATCGGGGGTTAATCTTTTCCAATATCTT 12346 Query 23992 ATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATAC 24051 | |||||| || |||| ||||| | | ||||||| || | ||| || ||| Sbjct 12347 ACATCTTTGGACAAATTCACTTCTGCCA---TCCAAAAGGAAGCAACGGCCTTTTTGTAC 12403 Query 24052 ATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATC 24094 | ||||| | ||| ||||| | |||||| | || |||| Sbjct 12404 AAGAGCCACAAATCCAAGTGTTGAAGGGGAAATGTGACAAATC 12446 >seq38288 Length=11396 Score = 237 bits (262), Expect = 2e-57 Identities = 372/533 (70%), Gaps = 6/533 (1%) Strand=Plus/Plus Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 || ||||| ||| |||||||| || ||||| |||||||| | ||| ||||| | || Sbjct 7659 TTGAACAAGTGACAGGCAAAATCCCAGTGTAGTCCTTCATCTCGACTCATCAACTTGTTG 7718 Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616 ||| |||||||| ||||||||| | ||||| || | |||||| || || | ||| || Sbjct 7719 CTAAACGTTAATCCAGGCATTAATTCCCGTTTCTTTAACCAAAAAATAGCCGAAAAGGAA 7778 Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 || || || || || || || ||||| ||||||||||| | ||| | |||| | || | Sbjct 7779 CCTGAGAAAAAGATTCCTTCCACAGCGGCAAAGGCCACCAACCGTTTTGCAAAAGATGGA 7838 Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTT 23736 || | ||||| ||| || ||| | ||||| || | || || ||| Sbjct 7839 TTTTGT------ATCCAATTTAATGCCCATTCTGCCTTTTTCTTAAAGCAGGAAAGGGTT 7892 Query 23737 TCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGT 23796 ||||| || || || | | ||||||||| || |||| || | ||||| || Sbjct 7893 TCAATGGCGTTAAACAATTTATTTTTTTCTTGATGATCTCAAATGAGGATCTCAATCAGC 7952 Query 23797 AAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTA 23856 || || |||||||| ||||| ||||||||||| ||||||||||| |||||||| || | | Sbjct 7953 AAGCTGTACATTTCTGAATGTATATTTTCAATGGCAATCTGAAAGCCATAAAAGCAACGA 8012 Query 23857 GCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916 |||| | || || || || | || | || |||||||||| | ||||||||| Sbjct 8013 ACTTCGGTCACTTTGACTTCGCGAGCGAAGCGTTCCACTAAATTTTCAATTACAATACCA 8072 Query 23917 TCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAAT 23976 ||||| || ||||| || || ||||||| | |||||| | || ||| | | |||| Sbjct 8073 TCACTGGCGGCAAAAAAGGCCAGAACATGGGAAAGAAAATGCCATTTATCGGGGGTTAAT 8132 Query 23977 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 ||| |||||| |||||| || ||||| ||||| || | ||||| || Sbjct 8133 CTTTCCCAATCTCCCCCATCTTTGGACAAATCCACTTCTTCTGCCGTCCAGAA 8185 >seq4663 Length=104512 Score = 190 bits (210), Expect = 2e-43 Identities = 540/809 (67%), Gaps = 42/809 (5%) Strand=Plus/Plus Query 23239 CTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCCATAAAATCAAATGGATTA 23298 || || || || || |||||||| |||| |||||||||||||||||||| || || || Sbjct 34252 CTATCAAAGAAGTTAGTCTTACCTACTAAAGATATATTTTCCATAAAATCGAAAGGGTTG 34311 Query 23299 GAAGTATTATATACAGCTTTACATGATAATTCCT--TTAA-AAGC---CTATCTGCTACA 23352 | || ||||| | | | | || || || |||| |||| || || || | | Sbjct 34312 GCTGTGTTATA-ATATTTCTCCA-----ATCCCAAATTAATAAGCAATCTGTCAGCCATA 34365 Query 23353 AATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTACTGGAATCGCA 23412 ||||||||||| | |||||| || | | | || || |||| || |||||||| | || Sbjct 34366 AATTCAATATACTCACACATTAATTTACAATTCATTTCTATAAGATTTACTGGTAA-GCT 34424 Query 23413 T-CATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAACAATAACTTC 23471 | || ||| ||| || ||| ||| |||| ||||||| ||| | | || Sbjct 34425 TACACTTAAAAATTATTGTTCTATGATGACAGATTCTTTAACTATATCGAGTATG----- 34479 Query 23472 TTCACTAGG-TGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAGGC 23530 | | || | | || || ||||| || | ||||||||||||||| || || | Sbjct 34480 -TAAGGAGACTTGTTAATT-AAATATTTGTTAAGGTGACATGCAAAATCACAGTGAAGTC 34537 Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || ||||| | |||||| | || |||| | ||||| | ||| || || | Sbjct 34538 CTTCATCTCTGCTAATAAGTTCATTGGCGAAGGTTAGGACAGGCATCAGTCCACGATTCT 34597 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||| || |||| |||||||| || |||||||| || || || ||| ||||| | Sbjct 34598 TCAACCAGAAGATTGAAGCAAATGCACCCGAAAAGAATATTCCTTCTACACAAGCAAATG 34657 Query 23651 CCACAAGACGTGTACCAAAT--GTTGCATTATAATCAGAAATCCAtttttttGTCCAATT 23708 | || | ||| || |||| | | | || | |||||||| | ||| | Sbjct 34658 CTACTACACGAGTGGTAAATTAGATTCCGGGTATT---GTATCCATTTCAAAGCCCAGTC 34714 Query 23709 AGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCT-- 23766 ||| ||| || | || ||||| ||| | ||||| ||| || | |||| Sbjct 34715 AGCTTTCTTCTTAATGCATGGTATTGTGGTAATAAC-ATTAAG-CAAATGTGTCTTCTGA 34772 Query 23767 TCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCA 23826 || | ||| || ||||| | ||| ||||||| | |||||| || | ||| ||||| || Sbjct 34773 TCCTGATCAGTAATATAAGCATCTATTAGTAGAGAATACATCTCGGTATGGATATTCTCT 34832 Query 23827 ATAGCAATCTGAAACCCATAAAAACATCTAGC-TTCAG-ACAATTGAACATCATTAAAAA 23884 || || | || || |||||||| ||| | || || || ||||| || ||| ||| || Sbjct 34833 ATTGCTACTTGGAATCCATAAAAGCATTTTGCTTTTAGTACAAT--CACTTCAGTAATAA 34890 Query 23885 ATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC-AAAGAAAGCAAGAACA 23943 |||||| | | || | | || ||||| ||||| | ||| ||| |||||||| | Sbjct 34891 ATCTTTCTACAAGATCTGCATTCACAATTCCATCTGATGAAGCAAAAAAAAGCAAGGATG 34950 Query 23944 TATTTTATAAAATGTCTTTC---ATCAGTTGATAATTTTTTCCAATCATTAATATCTTTT 24000 | | ||||||| ||| || |||||| | | |||||||| |||| | Sbjct 34951 TTTGAAATAAAATATCTCTCGTTATCAGT---CAGAGTAGACCAATCATGTCTATCAGCT 35007 Query 24001 GATAAATCAACTTCATCAACTGTCCAAAA 24029 |||| ||||||||| ||||||||||| || Sbjct 35008 GATAGATCAACTTCTTCAACTGTCCAGAA 35036 >seq77092 Length=4929 Score = 125 bits (138), Expect = 7e-24 Identities = 186/264 (70%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571 ||||||||||| ||||| |||||||| | |||||||||||| || ||| |||||||| Sbjct 275 GCAAAATCACAGTGTAGTCCTTCATCTCGACTAATCAATTCGTTGCTAAACGTTAATCCA 216 Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631 ||||||||||| ||||| || | || ||| || || ||||| | | || || || || Sbjct 215 GGCATTAATCCCCGTTTCTTTAACCGAAAAATGGCCGCAAAGCAACATGAGAAAAAGATT 156 Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691 || || ||||| ||||||||||| ||| | |||| | || ||| | ||| Sbjct 155 CCTTCCACAGCGGCAAAGGCCACCTATCGTTTTGCAAAAGATGGATTTT------GTATC 102 Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAG 23751 || ||| || ||| | ||||| || || | || |||||||| || || || Sbjct 101 CAATTTAATGCCCATTCTGCCTTTTTCTTAACGAAAAAAAGAGTTTCAATGGCGTTAAAC 42 Query 23752 AGAAAAGTTTTTTCTTCATTATCT 23775 | | | ||||||||| || |||| Sbjct 41 AATATATTTTTTTCTTGATGATCT 18 >seq5663 Length=92856 Score = 113 bits (124), Expect = 5e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23896 AAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAA 23955 || ||||| || ||||| |||||||| |||||||| || || | || || |||||| Sbjct 71992 AAGTTTTCATTCACAATGCCATCACTGGCAGCAAAAAAGGCTAAAATATGGGAGATAAAA 71933 Query 23956 TGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCA 24015 || |||| || | | |||||||| |||||| | | |||||||||||| |||||||| Sbjct 71932 TGCTTTTCTTCCGGTTTTAATTTTTCCCAATCTATCAGATCTTTTGATAAGTCAACTTCT 71873 Query 24016 TCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGT 24075 ||| | |||||||| ||| || ||| |||||| |||| || || | || | Sbjct 71872 TCAGCAGTCCAAAATGATGCTTCAGCTTTCTTGTACATTTGCCAGATGTCCTGATACTCA 71813 Query 24076 ATTGGAAATATTACGAATCT 24095 || |||||||| || || || Sbjct 71812 ATAGGAAATATGACAAACCT 71793 Score = 104 bits (114), Expect = 2e-17 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 23762 TTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATAT 23821 |||| | |||||| | ||||| ||||| || || | || |||||||||||||| | || Sbjct 73668 TTTCAGCCTTATCTTTAATATAAGTATCTATAAGAAGGCTGTACATTTCAGAATGTACAT 73609 Query 23822 TTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATC 23876 ||||||| || || || |||||||||||||| || ||||||| || |||||| || Sbjct 73608 TTTCAATGGCGATTTGGAACCCATAAAAACACCTTGCTTCAGTCACTTGAACTTC 73554 >seq76486 Length=4962 Score = 105 bits (116), Expect = 7e-18 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 23524 TGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCT 23583 |||| |||||||| | ||||||||| || || ||| |||||||| ||||||||||| Sbjct 225 TGTAATCCTTCATCTCGACTAATCAACTCGTTGCTAAACGTTAATCCAGGCATTAATCCC 166 Query 23584 CGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCC 23643 ||||| || | |||||| || || ||||| || || || || || || || || ||||| Sbjct 165 CGTTTCTTTAACCAAAAAATGGCCGCAAAGGAACCAGAGAAAAAGATTCCTTCCACAGCG 106 Query 23644 GCAAAGGCCAC 23654 |||||||| || Sbjct 105 GCAAAGGCTAC 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520313113610400