Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2234 122 6e-23 >seq2234 Length=154088 Score = 122 bits (134), Expect = 6e-23 Identities = 170/237 (72%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| |||||| |||||||||| | ||||||||||| ||| || |||||||| || Sbjct 10974 TATTTGCATTCCTCCTCTCAGTCGGAGAACCAGGTGAAGAGTGGATTCTTTTTGGATATT 10915 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 |||||| | || || | || || |||||||| || |||||||||| | |||||| Sbjct 10914 GTAATCTGAAAGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTG 10855 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 ||||| || | ||| || || || ||||| ||||| || | || ||||| Sbjct 10854 ATCTGGTGGGATACCCTCTTTATCTTGAATCTTGGCCTTCACATTTTCGATTGTGTCACT 10795 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| || | || || || ||||| || || |||||||| ||||| ||||| Sbjct 10794 AGGCTCCACTTCAAGAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAAGATCTGCAT 10738 Score = 107 bits (118), Expect = 1e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| |||||||| |||| |||||| || ||||||||||||||||| Sbjct 11883 TTGCATGCCTCCTCTTAGTCTCAAGACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTA 11824 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | || || | || || |||||||| || |||||||| || || || ||||| Sbjct 11823 GTCCGACAGAGTACGTCCATCTTCTAGCTGCTTGCCCGCAAAGATTAATCGTTGTTGATC 11764 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | ||| | ||||||||| || || || || | || | || || || | Sbjct 11763 AGGAGGGATACCTTCCTTATCTTGAATTTTAGCTTTGACATTTTCAATTGTATCACTTGG 11704 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | ||||| ||||| || || || || || |||||||||||||| Sbjct 11703 CTCAACTTCTAGTGTAATTGTCTTCCCAGTAAGAGTTTTGACGAAGATTTGCAT 11650 Score = 98.7 bits (108), Expect = 7e-16 Identities = 168/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || || | || || ||||| ||| |||||||| |||||||| || Sbjct 10740 CATACCACCTCTGAGCCTGAGAACTAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTC 10681 Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 | ||| || || | || |||| || || || ||||||||||| || || |||||| Sbjct 10680 CGAGAG--GGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCGTTGTTGATCT 10623 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284 | ||| | ||||| || ||| ||||| ||| | || | ||||| || | Sbjct 10622 GGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTTACATTTTCAATGGTATCACTAGGC 10563 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGA 44344 || ||||| | || || ||||| || ||||| || ||||| || || ||||| ||| | Sbjct 10562 TCAACCTCTAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACAAAAATCTGCATTTTGTAA 10503 Query 44345 AT 44346 || Sbjct 10502 AT 10501 Score = 98.7 bits (108), Expect = 7e-16 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| || ||||| || || || || ||||| ||||| || Sbjct 12111 TTGCATGCCTCCTCTGAGTCTTAAAACCAGATGCAGAGTAGATTCTTTTTGAATGTTATA 12052 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || || || ||||| || ||||| || |||||||||||||| Sbjct 12051 ATCCGACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAAATTAAACGCTGCTGATC 11992 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGG 44282 || || | ||||| || ||| || || ||||| || || | ||||| || | Sbjct 11991 TGGGGGAATTCCTTCTTTGTCCTGGAT-TTTTGCTTTAACATTTTCAATGGTATCACTTG 11933 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || || | ||||| || || || || || ||||| || || ||||||||| Sbjct 11932 GTTCGACTTCTAATGTAATTGTTTTACCTGTTAGAGTCTTTACAAAAATTTGCATG 11877 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| | ||| | || || || || || ||| ||||||||||||||||| Sbjct 12336 CATCCCTCCTCTTAATCTGAGAACTAGATGGAGTGTAGACTCTTTTTGGATGTTGTAATC 12277 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || ||||| || || ||||| |||| | |||||||||| Sbjct 12276 CGACAGGGTACGCCCATCTTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCTGG 12217 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||||| || || || || || | || | || || ||| | ||| Sbjct 12216 TGGAATGCCTTCTTTATCTTGAATTTTTGTTTTGACATTTTCAATTGTATCGCTTGGTTC 12157 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || | || || |||||||| |||||||| || || || ||||||||| Sbjct 12156 TACTTCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAAATTTGCATG 12105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359199635637612