Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2234 93.3 4e-14 >seq2234 Length=154088 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709 ||| ||||||||||| || || || ||||||||||| || || || || || | || Sbjct 12090 TAAAACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATCCGACAGAGTACGGCCATC 12031 Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 || || ||||| || || || || | ||||| || || | ||||| | || ||||| Sbjct 12030 TTCTAGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGGGAATTCCTTCTTTGTC 11971 Query 41770 CATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 | || ||||||||| ||| | | || || || | || || || | || || | Sbjct 11970 C-TGGATTTTTGCTTTAACATTTTCAATGGTATCACTTGGTTCGACTTCTAATGTAATTG 11912 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| || || |||||||| ||||| |||||| Sbjct 11911 TTTTACCTGTTAGAGTCTTTACAAAAATTTGCATG 11877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461262452203200