Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq49004 84.2 2e-11 >seq49004 Length=3997 Score = 84.2 bits (92), Expect = 2e-11 Identities = 129/180 (72%), Gaps = 8/180 (4%) Strand=Plus/Minus Query 17000 ATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATC 17059 |||||||| || || ||||| ||||||||| |||||||| || ||||||||||| Sbjct 297 ATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATT 238 Query 17060 GCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCG 17119 | || || || || || ||||| ||||| || | ||||| ||||||| ||||| Sbjct 237 GAAGCAAAGCTGCCCGAGAAAAATATTCCCTCAACCGCCGCAAAAGCGATTATACGTTCT 178 Query 17120 GCGTACGTCG-CGTCTTTGTTACGAATCCATTTCTGCA---CCCACTCGGCTTTTTGCTT 17175 || | || | |||| ||| ||| |||||| ||||| |||| || || || | ||| Sbjct 177 GCAAATGTGGCCGTC-TTGCTACCAATCCA---CTGCAATGCCCAGTCTGCCTTCTTCTT 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515244197633880