Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq172127 91.5 2e-13 seq49004 91.5 2e-13 >seq172127 Length=1698 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 119014 CCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACTCGTACTTATCGTTTAAGTAGATA-C 119071 || || ||||| || |||||| | ||||| | ||| ||| | ||| || ||||| ||| | Sbjct 878 CCAACATATCCATTAGGATCTCTGCCGTCAACACT-GTAATGATCATTCAAGTAAATAGC 820 Query 119072 AGACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACA 119131 | || | ||||| ||| || | || ||||||| | || || || |||||||| Sbjct 819 AAACT-TCAACGCCTGTTCTGGTGACTGGGTCCATTCTAAAATCTTCTTGCACCAGTACA 761 Query 119132 TACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATA 119191 | |||| | ||||||||||| ||||| || | || ||| | ||| || | |||||||| Sbjct 760 TGCGTAGGAAACCGTGCATTTTGCCCTCTTTCACCAGCTGTATTTGAGCCGAGTTCCATA 701 Query 119192 GAGGATCGTGTGT 119204 | ||||||||| Sbjct 700 GGTCATCGTGTGT 688 >seq49004 Length=3997 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 16238 ATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATC 16297 |||||||| ||| ||||| || || ||||| |||||||| || ||||| ||||| Sbjct 297 ATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATT 238 Query 16298 GCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCC 16357 | |||||| ||||| || ||||| |||||||| | ||||||||||||| ||||| Sbjct 237 GAAGCAAAGCTGCCCGAGAAAAATATTCCCTCAACCGCCGCAAAAGCGATTATACGTTCT 178 Query 16358 GCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTT 16407 || | || || || ||| |||||| | | | |||| || || || Sbjct 177 GCAAATGTGGCCGTCTTGCTACCAATCCACTGCAATGCCCAGTCTGCCTT 128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509140261624120