Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq32923 181 8e-41 seq121238 105 5e-18 >seq32923 Length=5192 Score = 181 bits (200), Expect = 8e-41 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 13216 ACTGGCCCCGTTGTATGAAGCAGAGACCCGAGCAGATGGCGGATGCCGGTTTCTTCTACA 13275 ||||||| || || ||||||||| |||||| | | || || || || |||||||||| Sbjct 1722 ACTGGCCTCGCAGTTTGAAGCAGAAGCCCGAGGAACTCGCCGAAGCGGGATTCTTCTACA 1663 Query 13276 CTGGCTACGGTGACAATACAAAGTGCTTCTATTGTGACGGCGGATTGAAAGATTGGGAGC 13335 | ||| | || ||||| || ||||||||||| ||||||||||| | || || |||||| Sbjct 1662 CCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGCCTCAAGGACTGGGAGA 1603 Query 13336 CGGAAGATGTACCTTGGGAACAGCATGTAAGATGGTTCGACCGTTGCGCCTACGTTCAGC 13395 || || || || ||||| ||||| | | ||||||||||| |||||||||||||||| Sbjct 1602 ACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTTCAGC 1543 Query 13396 TAGTCAAGGGTAGAGACTACGTACAGAAAGTCATCACGGAAGCCTGCG 13443 | |||||||| |||| || || ||||| || ||||| || || |||| Sbjct 1542 TGGTCAAGGGCCGAGAGTATGTCCAGAAGGTGATCACAGAGGCGTGCG 1495 >seq121238 Length=2101 Score = 105 bits (116), Expect = 5e-18 Identities = 281/427 (66%), Gaps = 2/427 (0%) Strand=Plus/Plus Query 6850 GTTCGCTCCCTTTCCTCCCGGAAACTCCCAGTCAATATCCACTCCGTCGAAAAACTTCCA 6909 ||| || || || || || || |||||||| || ||||| || || ||||| || ||||| Sbjct 872 GTTAGCGCCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCA 931 Query 6910 CGTCTCCAGAAACTCGCGCACGCTCTGCACAAACACCCGACGCTTGGCGGAGTCGTGCAT 6969 || |||||||| || ||||||||| | ||| | ||| | Sbjct 932 TGTTAAAAGAAACTCCTTGACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACGAA 991 Query 6970 CTTGTAGAAGGGGTCGCTAAGCGTCCACCCGCCTATGGAGGGTAGTATAGTCAGATTGGG 7029 | |||| || || |||||||||||| || || ||||| || || ||| || ||| Sbjct 992 AAAGAAGAATGGATCAGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAAATCGGG 1051 Query 7030 GTTGTGGTGTTTGATGGCCATCAGCTGGCCAAAATTACCCTTATACGGCTCGTCGTACGC 7089 | ||||||| | ||||| ||||||||||| || || || || || | | | Sbjct 1052 TCGGGCTTGTTTGAGAGACATCAATTGGCCAAAATTGCCTTTGTAGGGTTCATTCCATGA 1111 Query 7090 CTCCACACCCTTTTGTGGTTTCTGTACGGCGCCCCACAAATCGTGTATACTCACTTTGAA 7149 || || |||||||||| |||| || |||| ||| || || |||||||| Sbjct 1112 AGACAATCCTCTTTGTGGTTTTTGTAATGCTGCCCATGGATCATGGATTGAGACTTTGAA 1171 Query 7150 ATCGTCTCGGCCCGCGCACGATCTTTGCAACGCTT-CAAACGACCCCGGCACCTGTTTCA 7208 ||| || ||||| || |||| || || |||| |||| || | | || ||| | Sbjct 1172 ATCCTCGCGGCCGCTACAAGATCGCTGTAATGCTTGGAAACTGCCTTCG-ATCTCTTTTA 1230 Query 7209 AGGCGTCGTTGAGTCCGTCTCCCCCGCAAATGGGCACAAATCCGTACAGCAAATGGCTGA 7268 || ||| |||| ||||| || |||||||| || | || ||||| || | ||| | | Sbjct 1231 AGCTGTCATTGATACCGTCACCGCCGCAAATTGGAATGAAGCCGTAGAGTAGATGAGTAA 1290 Query 7269 GATTGGG 7275 |||| || Sbjct 1291 GATTAGG 1297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393362314555561