Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq54613 91.5 1e-13 seq2515 87.8 1e-12 >seq54613 Length=3623 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 ||||||||| | ||||| || || | |||||| | || || ||||| || || ||||| Sbjct 2634 CTCCTTTTGGATGTTGTAGTCAGAAAGTGTACGGCCATCTTCTAATTGCTTTCCAGCAAA 2575 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||||| || |||||||| | || | ||||| || || || |||| || | Sbjct 2574 AATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATT 2515 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| || ||| ||| || || || | || || ||||| || || || ||||| || Sbjct 2514 TTCAATAGTATCGGAAGCTTCAACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTGAC 2455 Query 43098 AAAAATTTGCATTTT 43112 |||||| |||||||| Sbjct 2454 AAAAATCTGCATTTT 2440 >seq2515 Length=4501 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||| || |||| | ||| | ||| | ||| |||||||| | || ||||| ||| Sbjct 3693 CCTCCGCGAAGTCGCAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTATAATCAGAC 3634 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 ||||||||| | || || | || || || ||||| |||||||| || || || | || Sbjct 3633 AATGTACGTCCATCTTCTAGCTGCTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGA 3574 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || |||| |||| || | ||| || || || || || Sbjct 3573 ATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATAGTATCAGAGGCTTCCACC 3514 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || || ||||| || || || || || || |||||||||||| Sbjct 3513 TCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 3466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379716136464978