Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq83301 102 1e-16 seq2920 87.8 3e-12 >seq83301 Length=2719 Score = 102 bits (112), Expect = 1e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATG 70252 ||||||| ||||| || || | | || |||||||||| ||||||| | ||||| Sbjct 866 AATCCAAGTGATAGAAGAATGTTGGTATGTGCATGGAATCCCTCAGATTTAAGCAAAATG 807 Query 70253 GCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATGC 70312 ||||| || || |||||||| || | ||||| | | | ||| || | || || Sbjct 806 GCACTTCCTCCATGTCACTGCTTAGTACAGTTCCATGTATCCAGTGGAAAGCTTTCGTGT 747 Query 70313 TTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTAT 70372 | ||||| || || ||||| || ||||| || ||||| || || || || || || ||| Sbjct 746 CTGATGTACCAAAGAAGTGCAGATATGGGTCTTGGTGTTCCTTTCAATATAGCTAGTTAT 687 Query 70373 TCTATGTTGACGCACATGATTGCTCA 70398 || | ||||| || ||||||||||| Sbjct 686 GCTCTATTGACTCATATGATTGCTCA 661 >seq2920 Length=6922 Score = 87.8 bits (96), Expect = 3e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 70421 GAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAG 70480 ||||| || ||||| | || ||| | || || || | ||||| || || || |||||| Sbjct 21 GAGTTTGTTCACACAACAGGTGACACACATGTATACCTTAATCATATTGAACCTTTAAAG 80 Query 70481 GTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAA 70540 | ||| | || | | || ||||||||||| | ||||| ||| | | ||| || | Sbjct 81 GAACAATTACAAAGAGTACCAAGACCTTTTCCTACACTGGAATTTACAAGAAAAATTAAT 140 Query 70541 AATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAGGTTACGATCCATACCCTAAG 70600 |||||| ||| || || |||||||||||||| ||| || |||| || || || Sbjct 141 TCTATTGATGATTTCAAATATGAAGATTTTATAATTAAAAACTATAATCCTTATCCAAAA 200 Query 70601 ATTCCCATGGTTCTGGCTGTTTA 70623 ||| ||||| |||| ||||| Sbjct 201 ATTAACATGGAAATGGCAGTTTA 223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 737763885739160