Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq143025 86.0 7e-12 >seq143025 Length=4707 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATTTATC 19421 |||| || ||||||||||||||| | | ||||||||| || ||||| || |||| Sbjct 2255 AAATTGGGGATAAGTTTGCTTCTCGTCACGGTCAAAAAGGAACCTGTGGAATCCAGTATC 2314 Query 19422 GTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCAC 19481 | |||||||||||||| ||||| || || || ||| ||| | |||||||| || | Sbjct 2315 GCCAAGAAGATATGCCGTTTACATGCGAGGGCTTAACGCCAGATATCATTATTAATCCCC 2374 Query 19482 ATGCTTTTCCAAGTCGAATGAC 19503 |||| | || ||| ||||| Sbjct 2375 ATGCCATCCCTTCTCGTATGAC 2396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593222298735600