Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq195815 104 1e-17 >seq195815 Length=1339 Score = 104 bits (114), Expect = 1e-17 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || ||||| || ||||||||||| || || ||||| || || ||| || | ||| || Sbjct 1181 GGCTTCTCTGTGGAGGGTCAAGAGTTGATTCAGGAAATATTGTCTAAACAGTTATATCTG 1122 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 || ||||| || ||| |||||| | | |||| ||| || |||| |||| |||| | Sbjct 1121 TGCCAATGCCTAGCTGCCTTGATGTTGGTGCGAACTGGAGGCCATTTTGTTGTCAAGCTA 1062 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTT 4078 || ||||| ||||| | ||| |||| | || | || || | |||||||||| |||| Sbjct 1061 TTTGATATCTTTACCCATTTCAGTGTTAGTCTTGTTTACATTATGTATAGATGTTTT 1005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275354576026723