Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2216 134 2e-27 seq193777 116 6e-22 >seq2216 Length=5370 Score = 134 bits (148), Expect = 2e-27 Identities = 190/267 (71%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| | | | || || ||||||||||| || ||||| ||||| || ||| Sbjct 1153 GCGAAGCGTCACAGGAAAGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCTGCGATC 1212 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || || | || || ||||| ||| | || || || | || || |||| | Sbjct 1213 CGTCGTCTCGCCCGCAGAGGCGGCGTCAAACGTATATCCGGTCTGATATACGAGGAGACT 1272 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | |||||| ||| ||| |||| || || || || |||||| Sbjct 1273 CGCGGCGTGCTGAAGGTGTTCCTCGAGAACGTGATCCGCGACGCAGTCACGTACACCGAG 1332 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| |||||| ||||||| |||| || || |||| || || || Sbjct 1333 CACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGGCAGGGG 1392 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || ||||| || ||||| Sbjct 1393 CGCACTCTGTACGGTTTCGGCGGTTAA 1419 >seq193777 Length=1796 Score = 116 bits (128), Expect = 6e-22 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 |||||||||||||| |||||||| |||||||| | | | || | ||||| ||||| Sbjct 1516 GATAACATCCAAGGCATCACCAAACCAGCTATTAGAAGATTAGCAAGACGTGGCGGAGTT 1457 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 || || | ||||| || | || ||||| | || | || |||||||| || || | Sbjct 1456 AAACGCATTTCTGGTTTAATTTACGAAGAAACGCGCGGAGTATTGAAGATTTTTCTAGAA 1397 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | || || | |||||| | ||||| || |||| |||| | |||||||| || | Sbjct 1396 AATGTCATTAAAGATGCTGTGACTTATACTGAACACGGTAAAAGGAAGACTGTTACAGCA 1337 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 ||||| | || || ||||| ||||| |||||||| | | | ||||| || ||| Sbjct 1336 ATGGACGTAGTTTACGCATTAAAACGACAAGGCCGCACGTTATATGGATTCGGA 1283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78749943513513