Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq8090 98.7 1e-16 >seq8090 Length=6400 Score = 98.7 bits (108), Expect = 1e-16 Identities = 173/252 (69%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 685 CACTCAAAGAAAACGTGCTCTGCATCTTCATTGACTCCTGGGCAGGATGGGCACTCTGGG 744 || |||||||| || ||||| || || || | || ||| || || |||||| Sbjct 268 CATTCAAAGAATACATGCTCAGCGTCCTCTCGCTCACCACAACAGCTGGGACATTCTGGG 209 Query 745 GAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACATC 804 |||| || || ||||||| | ||| ||||| || ||||| || || | |||| Sbjct 208 GAATCCTCGTGTCCAAAGCGGTGCAAATAATATCGGAAGCAACCGTGGCCGGAGAGCATC 149 Query 805 TGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTGGT 864 || || ||||| ||||| |||||| || | ||||| |||| | | ||| | ||| Sbjct 148 TGGGTGAGATAGTAGTTTGTCTCACCATGCTTGCGGTTGTGCCATAGTTCGATTTTCGGT 89 Query 865 ATGAGACGATGCGTCCATCTACCATTCACTGTGGCATCCCACTGTAGTTGCCATCGACTT 924 |||||||||| |||||||| || || || || |||||| |||||||||| Sbjct 88 ATGAGACGATAGGTCCATCTTCCTTTGTTTGAGGTGTCCCACATCAGTTGCCATCTCTCA 29 Query 925 ATGCTCCTCCGT 936 |||||| ||||| Sbjct 28 ATGCTCTTCCGT 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50740827996526