Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq139650 111 2e-19 seq49004 87.8 2e-12 >seq139650 Length=2376 Score = 111 bits (122), Expect = 2e-19 Identities = 224/327 (69%), Gaps = 8/327 (2%) Strand=Plus/Minus Query 131856 TTAATCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAG 131915 ||| || ||||||||| || ||||||||| ||||| | ||| | || | |||| | Sbjct 495 TTAGTCTTATGACTCCAGTATTACCTATGTTAGCTGAAGCTTGCAAGTCGGTTGAAATGG 436 Query 131916 CAATAGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTAC 131975 | || | |||| | | |||| |||| ||| || ||||||||||||| || || || | Sbjct 435 CTATGAAAAAATGTCCAAATGGCATGTTTTCTGAAATAAAATATGATGGAGAACGGGTTC 376 Query 131976 AAATTCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTA 132035 || | |||||||| | |||| | ||| |||||| | |||||||| || | Sbjct 375 AAGTCCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGG 316 Query 132036 CTCATAAAATTGATGGATTTGATAAACTGTTGA-CTGATGCATTTCCCACAGCAAAAAAC 132094 |||| ||| || | |||| | | | | || | || | |||||||| | || | | | Sbjct 315 CTCACAAAGTT-AGTCATTTTAAAGATTATTTACCTAAGGCATTTCCTAAAGGAGATGAT 257 Query 132095 TTCATTTTAGATGCGGAATTAATAATGATAGAT-ACAAAA--TCAAATTCATTTTTACCA 132151 || ||||| ||||| ||| || | ||| ||||| ||| | ||| || || || Sbjct 256 TTGATTTTGGATGCTGAAGTACTTATGGTAGATGTCAATACTGGAAAGCCA---TTGCCT 200 Query 132152 TTTGGTTCATTAGGTATACATAAAAAA 132178 |||||| |||||||||| || ||| || Sbjct 199 TTTGGTACATTAGGTATCCACAAACAA 173 >seq49004 Length=3997 Score = 87.8 bits (96), Expect = 2e-12 Identities = 179/257 (70%), Gaps = 7/257 (3%) Strand=Plus/Minus Query 21468 ACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAA 21527 |||| ||| || | |||| || || |||| |||||||| || | |||||| | Sbjct 339 ACATAAAA-ATACTAAATTACTGAACATACCT-CATCCCTAGAAATAAGTTCATTGCTGA 282 Query 21528 ATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCT 21586 | || || |||||||| | |||| ||||| |||||||||||||| ||||| ||| || Sbjct 281 AAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAA-GCTGCCC 223 Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG-ATTC 21645 || || || || |||||||| || ||||| || | || ||||| | |||| | || Sbjct 222 GAGAAAAATATTCCCTCAACCGCCGCAAAAGCGATTATACGTTCTGCAAATGTGGCCGTC 163 Query 21646 TTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATC 21705 || | | | ||||| | |||||| | |||||| | |||| ||| | || || Sbjct 162 TTGCTACCA-ATCCACTGCAATGCCCAGTCTGCCTTCTTCTTAACACACGGTAGAGTCTC 104 Query 21706 AATAGCTTTTAA-AAGA 21721 |||||| || || |||| Sbjct 103 AATAGCATTGAACAAGA 87 Score = 86.0 bits (94), Expect = 7e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 21125 ATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATT 21184 |||||||| ||||| ||||| | ||| ||||| || || | ||| | |||| Sbjct 2132 ATTTAAAATTCAGCGTCTAAAGTGAACACATTGTCCATAGGTTGCGCCATCACTCCCCAC 2073 Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATAT-AGA 21243 || ||||| || | ||| | || || || || ||||| || ||||||||||| || ||| Sbjct 2072 TTCTGATATTCTCCTACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTCCAATGAGATGAGA 2013 Query 21244 TTCCATAAAATCAAATGGATT 21264 ||| ||||||||||||||||| Sbjct 2012 TTC-ATAAAATCAAATGGATT 1993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529535563468840