Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq121238 316 2e-81 seq7548 140 3e-28 seq55701 127 2e-24 seq172127 125 7e-24 >seq121238 Length=2101 Score = 316 bits (350), Expect = 2e-81 Identities = 814/1223 (67%), Gaps = 40/1223 (3%) Strand=Plus/Minus Query 62039 AAAGTCGTTGCCGCATATTTTGTCGAATGGGGCGTTTATCCTAGAAACTTTCCTGTAGAT 62098 ||||| || | || ||||| || |||||||| ||||||||||| || || ||||| ||| Sbjct 1369 AAAGTTGTGGGTGCTTATTTCGTAGAATGGGGTGTTTATCCTAGGAAATTCCCTGTGGAT 1310 Query 62099 CGAGTGCCTACTCCTAATCTATCGCATGTTCTCTATGGATTTATTCCTATATGCGGCGGC 62158 || | |||| |||||||| | ||| | ||||| || || ||||| || |||||||| Sbjct 1309 CGTATACCTATACCTAATCTTACTCATCTACTCTACGGCTTCATTCCAATTTGCGGCGGT 1250 Query 62159 GACGGCATTAACGACAGTCTCAAGACCATAACCGGTAGTTTTGAAGCTCTTCAGCGGTCG 62218 ||||| || || ||||| | || || || ||||| |||| | ||||| || Sbjct 1249 GACGGTATCAATGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCATTACAGCGATCT 1190 Query 62219 TGTTCGGGTCGAGACGACTTTAAAGTGTCGATTCATGACCCGTGGGCTGCCGTCCAGAAA 62278 ||| || || || || || ||||| || || ||||| || ||||| || | || ||| Sbjct 1189 TGTAGCGGCCGCGAGGATTTCAAAGTCTCAATCCATGATCCATGGGCAGCATTACAAAAA 1130 Query 62279 CCACAAAAACAAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTTGGTCAATTGATG 62338 ||||||| | | | | | ||||| ||||| |||||||| |||||||| ||||||||| Sbjct 1129 CCACAAAGAGGATTGTCTTCATGGAATGAACCCTACAAAGGCAATTTTGGCCAATTGATG 1070 Query 62339 GCAGCCAAACTGGCGAATCCTCACATTAAAGTGTTACCTTCGATAGGCGGCTGGACATTA 62398 | ||||| || || | | || | | || || || || || ||||| | Sbjct 1069 TCTCTCAAACAAGCCCGACCCGATTTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTT 1010 Query 62399 TCCGATCCGTTCTTTTATTTTCACGATGTGGCCAAACGCAAGA------TTTTTGTCGAT 62452 | ||||| ||||| | ||||| || | |||| |||| ||||| | Sbjct 1009 GCTGATCCATTCTTCT-TTTTC-----GTTGACAAATCTAAGAGAACACGATTTGTGCAG 956 Query 62453 TCCGTCATAGAATTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGATTGGGAG 62512 || |||| || ||| | || |||||||| ||||||||||| || |||||||||||| Sbjct 955 TCAGTCAAGGAGTTTCTTTTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAG 896 Query 62513 TTTCCCGGCGGGAAAGGCGCCAATCCCAACGTAGGCGACGTC--GAACGCGATCGCGAAA 62570 || || || || |||||||| || || || | || || ||| ||| ||| | || Sbjct 895 TTCCCTGGTGGCAAAGGCGCTAACCCTGACCTTGG-GA-GTCCAGAA---GATGGTGATT 841 Query 62571 CGTACACGATTCTGTTGAGAGATTTACGCGAAGCCCTCGACCGTCTCTCAATCGAAACGA 62630 || | | || ||| ||| ||||| || ||||| |||||| | | || Sbjct 840 GTTATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAACTCTCA---GCTAAGA 784 Query 62631 ATCGAACG---TACGAATTGACTAGCGCGATCAGCGCCGGCGATGACAAAATTGCCGTAG 62687 || | | | |||||||| ||| || || ||||| || || ||||| || | Sbjct 783 ATGGTAAGAAATACGAATTAACTTCTGCTATTAGCGCTGGGTGGGATAAAATCCAAGTTG 724 Query 62688 TCGATTACACTGAAGCGCAAAAATATTTGGATTATAtttttttAATGACATACGATTTCA 62747 | || |||| | || ||||| ||| ||||| ||||||| || |||| ||||| |||| Sbjct 723 TTGACTACAGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCA 664 Query 62748 AAGGAGCTTGGTCGAATAGCGATTTGGGATATCAAACGACTCTGTACGCGCCTTCGTTTA 62807 |||| || ||||| ||| | | ||| ||||||| | ||||||||||| | | | Sbjct 663 AAGGTGCCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGA 604 Query 62808 ACCCTAAAGAGCATTATACGACCGATTTTGCCGT-TCGTGCTATGCTCAAGCAAA--AAG 62864 |||| || || ||| || | || || | || | || || | |||| | || Sbjct 603 ACCCCAAGGAAACTTACACTTCTGACTTCGGAGTAAAATACT-TGTT--AGCACAGGGAG 547 Query 62865 TCGAAAAC-AAAAAGATTATAGTCGGCGTGGCCATGTACGGTCGAGGTTGGACCGGCGTC 62923 | ||| | || |||||| |||| || || |||||||| ||||| |||||||| || || Sbjct 546 T-GAATCCTAAGAAGATTGTAGTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGAGTT 488 Query 62924 GGTGACTTTGTCGACGAAAATAATCCATTTTCCGGCACGGCTAAGGGACCGATCAAAGGT 62983 ||| | ||| || || ||||| || | |||| |||| ||||| |||| ||| Sbjct 487 CATGA---TTACGAAGACAACAATCCCTTCACAGGCAACGCTACTGGACCTGTCAAGGGT 431 Query 62984 ACCTGGGAGGACGGAGTCGTCGATTATAGAGAGATTTTTAATTCTTTTG--TGGGTAAAG 63041 || ||| | |||||||| ||||| || || || ||| ||| ||| | ||| Sbjct 430 ACTTGGCAAGACGGAGTGGTCGACTACAGGGAAATTGCCAATGAAGTTGCTCAAGGCAAG 371 Query 63042 ACGGCATTAATCGTTACGATTCCATCGCAAAAGCGGCATACGTCTTTAATAACGCGACCG 63101 || || | |||||| |||| |||| | |||||||| | | || | Sbjct 370 TGGGAGTT--CCATTACGACAATGTCGCCCAAGCACCTTACGTCTTCAGACCATCAACTG 313 Query 63102 GCGATCTCATAACCTACGACAGTCCTCAGTCGGTTCTGGATAAAGCAAAATATGTTTTGG 63161 | || || ||||||| || | | || || ||| | || || | || ||||| Sbjct 312 GAGACCTTGTAACCTATGATAATGCTAGATCAGTTATTGAGAAGGGTAAGTATGTAAGAA 253 Query 63162 ACTATAATCTGGGTGGTCTGTTCGCGTGGGAGATCGATGCTGACAACGGATTGCTTCTAA 63221 | | || || || ||||| || || ||||| ||||| || || ||||| || || | Sbjct 252 ATAACAAGCTAGGCGGTCTCTTTGCTTGGGAAATCGACGCCGATAACGGTGATCTACTGA 193 Query 63222 ACGCAATGAACAGCGGTCTCGGC 63244 | || ||||||| ||||||||| Sbjct 192 ATGCCATGAACATGGGTCTCGGC 170 >seq7548 Length=2633 Score = 140 bits (154), Expect = 3e-28 Identities = 874/1381 (63%), Gaps = 43/1381 (3%) Strand=Plus/Minus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 |||||||| || || | |||||||| ||||| || | || |||||||| || |||||| Sbjct 2242 ACGGTGAACTGTATAGCATTTGCTGCCGGTTTTGTGCGTAAGTAGTACATTCCTGTTTTT 2183 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTT---ATAGGTTGGATTG 147230 || ||| ||| ||||| | | ||||| || | || ||| |||| | || || Sbjct 2182 AAGCCCATTTTCCAAGCGTGGAAATGAATCGACGTTAG---TTTCCCATAGTTAGGCTTA 2126 Query 147231 GCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATG 147290 || ||| | || | ||||| || || || ||| ||| ||| | || || ||||| Sbjct 2125 GCAACATGTATGTTAAAAGATTGACTTTGGTCTATGAAAGCTCCTCTATCAGCCGCCATT 2066 Query 147291 TCCAACACTACTTTTTGTTT--AATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGT 147348 | | || |||| | ||| ||||| |||| ||| | | | | || | | Sbjct 2065 TGTATGG--ACGTTTTCAATGAAATCTCCCATACGGTTTTGTACAAATCTCTTATTTCTT 2008 Query 147349 GTGGAATTTCATCAATATTTTGTACAGATCCGTTGTTTTT---AATAATTTTTATCATGA 147405 ||||||| ||||| | ||||| |||||||||||| | ||||| ||| |||| | Sbjct 2007 TAGGAATTTTTTCAATTTCTTGTATAGATCCGTTGTTGTATAAAATAAGATTTTTCAT-A 1949 Query 147406 TATCTGTCGAATATACGTTGG-TGTCTACGAGTTTATCGACGAGATGCTGATTGACCACT 147464 | | || ||| | | || | | | | | | || | || || ||||| || || Sbjct 1948 TCTTCATCCCATAAA--TCGGCTCTGGTCAAATCTGTC-AGAAGGTGATGATTCACTACA 1892 Query 147465 TGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGAC 147524 || | || || || | ||||||| | ||| | || ||||| || || || ||| Sbjct 1891 GGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATGTTTGATGTAAAGGGTTCAAAAGAC 1832 Query 147525 TCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAA 147584 || ||||||| ||||| ||||| || | || || ||||| ||| | ||||| ||| Sbjct 1831 TCAGTGTTACCAAGAATTTGTGCTGTAGAGGCGGTTGGCATAGGAGCTAACAATAGAGAA 1772 Query 147585 TTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATTC 147644 ||||| || || || | || |||| | || || | |||||| ||| || || | Sbjct 1771 TTGCGCAAACCATGTTTTGCTATTTTTTCTTTGAGGGCAGCCCAGTCCCACAGTTCCGTA 1712 Query 147645 GATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATCG 147704 | ||| | | ||||| |||| | |||| | || || | || || || || Sbjct 1711 GGA--GTTT-TGTCCCACATATCATATTGTAGGATACCTTGGCTCACTGGACTCCCTTCA 1655 Query 147705 TAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTTAGTGCACCATAA 147764 |||| | ||||| || | || |||| ||| ||| || |||||||||| Sbjct 1654 TAAGTACTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAA 1595 Query 147765 TAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCTTGGCTGTCGTAGGGCATA 147824 ||||||||||| | || | || ||| | | | || | | || ||||| || || Sbjct 1594 TAAATAGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAGGTATT 1535 Query 147825 TCCAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTGTCTG 147884 || | | || ||||| || | ||| |||| ||| |||||||| || ||||| | Sbjct 1534 CTCATCAACACAAATGTATCTGCCATTCCCTGAACACCAATACCGATAGGCCGGTGCTTC 1475 Query 147885 AAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTATTGAGA 147944 | ||| || | || || || | |||||||| || | || || | ||| || | | Sbjct 1474 ATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAA 1415 Query 147945 TTATTGGTAACCACTCTAGATACATTGTAGAGCGACTTAAAGTCGAAGCTTTTAAACTGT 148004 || | || || | | | | | | | | ||||| | |||| || Sbjct 1414 TTTTGAGTGACAATTTTTGTGATTTCTTTTAATTTTTTAAAAT---------TAAATTGC 1364 Query 148005 TTATTGGCAA-AATTAT-TTACG-GCAATCGAGGCCAAGTTACACACGGCCGTTTC-TCG 148060 |||| ||| || || ||| | || || || || | || || || ||| ||| || Sbjct 1363 TTATGTTCAACAAACATGTTAAGTGCTATGGAAGCAAGATTGCATACTGCCACTTCATCT 1304 Query 148061 ATTGTCGCTATATTGAACGATTTCGGCACACAGATTGCTGTTTCGAATCACTCCCTCGtt 148120 || | | ||||| || | || | || |||||||| | ||| | | || | | Sbjct 1303 TCTGAAG-TGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAAT-AGTGCCAAGAT 1246 Query 148121 t-ttttGATTATTTTTATTGTTAACGTGATCTTTAAACATCATGTATGGAGCTCCGGTCT 148179 | ||||||||| | || ||||| ||| ||| ||| ||||||||| | || |||| Sbjct 1245 TCTTTTGATTACTCTTCCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 1186 Query 148180 CGACTTGAGTCTCAATAATTT--TTCTATGAAGATCTAAAGCCGAAATTTGTTTTTTAAA 148237 | ||||| | || |||||| ||| || | ||| ||| | ||||||| |||| Sbjct 1185 CCACTTGGGCTTCTATAATTGACTTCCATAAC--TCTTGAGCTCTGACTTGTTTTATAAA 1128 Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297 ||| || || || | || || || || || || | |||||||| || Sbjct 1127 TCGTTTTTCTTTTTCATATTTGGCATATAGTTCTTCAAACTCCTCTCCATAGCAGTCAGC 1068 Query 148298 TAAACCGGGACACTCGTCGGGGCACATCAATGACCATT-TCCCTCCTGTCTTTACCCTCT 148356 | ||| ||||| || | || ||||| | ||| | | |||| | | ||| || | Sbjct 1067 GAGACCAGGACAGTCATGAGGACACATTAGACTCCAAACTTCATCCTTT-TCTACTCTTT 1009 Query 148357 TCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGG 148416 ||||||||||||| ||| |||| | ||| ||| || || | ||| |||| || || Sbjct 1008 TCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCT 949 Query 148417 CACCCATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGATGT 148476 ||| | || | ||| ||| || || ||| | |||||| ||||||||||| | || Sbjct 948 TACCTGTGTTCTTCCTTAAATCTAAGAACTCAAATATGTCTGCATGCCAAGGCTCTAAGT 889 Query 148477 A 148477 | Sbjct 888 A 888 >seq55701 Length=1651 Score = 127 bits (140), Expect = 2e-24 Identities = 168/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || |||||||| ||||| || ||| | ||||| | ||| | ||| | Sbjct 524 ATGCAAATCTTCGTAAAAACCTTAACCGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 465 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || |||||| | || || ||||||| |||||||| || || ||||| |||||| Sbjct 464 GATACAATCGAGAACGTAAAGGCAAAGATTCAGGACAAAGAGGGCATTCCTCCAGATCAA 405 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAACGTCAGCGACTATA 26946 |||||||| |||| || ||| || ||||| ||||||| | | |||| ||||||| Sbjct 404 CAAAGACTAATTTTCGCCGGAAAGCAACTAGAAGATGGGCGTACATTGTCA--GACTATA 347 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 | ||||| || ||||| ||| | || | || ||| | ||||| || |||| Sbjct 346 ATATTCAGAAGGAATCAACTTTGCACTTAGTGCTGCGCCTTAGGGGTGGAA 296 >seq172127 Length=1698 Score = 125 bits (138), Expect = 7e-24 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||| || ||||| |||||||| | ||||| |||||| || ||||| ||||| | Sbjct 686 AAACACACGATGACCTATGGAACTCGGCTCAAATACAGCTGGTGAAAGAGGGCAAAATGC 745 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 |||| | |||||||||||||||| ||| |||||| | || ||||| || | || || | Sbjct 746 ACGGTTTCCTACGCATGTACTGGTGCAAGAAGATTTTAGAATGGACCCAGTCACCAGAAC 805 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 ||||| | ||| | ||||||| | || ||| |||||| | ||||| | ||||||| Sbjct 806 AGGCGTTGAAGTTTGCTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGATCCTA 865 Query 71850 ACGGTTATGTCGGT 71863 | || ||||| ||| Sbjct 866 ATGGATATGTTGGT 879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476533901989520