Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq83301 86.0 2e-11 seq40558 86.0 2e-11 >seq83301 Length=2719 Score = 86.0 bits (94), Expect = 2e-11 Identities = 105/140 (75%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 111669 AAAATGGCACTTCCACCATGTCAT--CTTATGTGCCAGTTTTATGTACACGACGGGATGC 111726 |||||||||||||| |||||||| |||| || | |||| ||||| | || | || Sbjct 812 AAAATGGCACTTCCTCCATGTCACTGCTTA-GTAC-AGTTCCATGTATCCAGTGGAAAGC 755 Query 111727 TTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTG 111786 |||| || | ||||| || || ||| ||||| |||||||||||||| || ||||| | Sbjct 754 TTTCGTGTCTGATGTACCAAAGAAGTGCAGATATGGGTCTTGGTGTTCCTTTCAATATAG 695 Query 111787 CAAGTTACGCACTACTTACT 111806 | ||||| || ||| | ||| Sbjct 694 CTAGTTATGCTCTATTGACT 675 >seq40558 Length=3576 Score = 86.0 bits (94), Expect = 2e-11 Identities = 102/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 65872 TTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACGC 65931 ||||| | ||||| ||||||| |||| | || | ||||||| | || |||| Sbjct 1940 TTACGGACAGTTCCATCATAATGTACCATAACAGACTCCATAGCCTTTATTAAACGACGC 1999 Query 65932 TGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGAC 65991 || || |||||| | | |||||||||||||| ||||||| |||||||||||| || | Sbjct 2000 TGAATATAACCAGTTTCAGCAGTTTTTACCGCAGTATCAATGAGACCTTCACGACCTCCC 2059 Query 65992 ATTGCA-GAAAAGAAAA 66007 || ||| ||||| |||| Sbjct 2060 ATAGCATGAAAATAAAA 2076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1297413003489462