Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq121238 181 9e-41 seq32923 161 8e-35 seq54613 113 4e-20 seq2515 102 7e-17 seq37844 95.1 1e-14 seq55701 86.0 5e-12 >seq121238 Length=2101 Score = 181 bits (200), Expect = 9e-41 Identities = 633/974 (65%), Gaps = 37/974 (4%) Strand=Plus/Minus Query 32176 TGCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTT 32235 ||| ||||| ||||||||||| || || | || ||||| | || | || | Sbjct 1358 TGCTTATTTCGTAGAATGGGGTGTTTATCCTAGGAAATTCCCTGTGGATCGTATACCTAT 1299 Query 32236 GCCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAA 32295 || ||| | | ||||| | ||||| || ||||| ||||||||||| ||||| | || Sbjct 1298 ACCTAATCTTACTCATCTACTCTACGGCTTCATTCCAATTTGCGGCGGTGACGGTATCAA 1239 Query 32296 CGATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCG 32355 || | | ||| ||| |||||||| | || | || || || || | ||||| Sbjct 1238 TGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCATTACAGCGATCTTGTAGCGGCCG 1179 Query 32356 CGCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGG 32415 || || || || || | || || || || ||||| ||| |||||||||| || | || Sbjct 1178 CGAGGATTTCAAAGTCTCAATCCATGATCCATGGGCAGCATTACAAAAACCACAAAGAGG 1119 Query 32416 CGTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTT 32475 ||||| | ||||| ||||||||||||||||| ||||||||||||||| | ||| Sbjct 1118 ATTGTCTTCATGGAATGAACCCTACAAAGGCAATTTTGGCCAATTGATGTCTCTCAAACA 1059 Query 32476 GGCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCC--- 32532 || || | | || ||| | || |||||||| ||||||||| | | ||||| Sbjct 1058 AGCCCGACCCGATTTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCTGATCCATT 999 Query 32533 CTTTTATTTTATGCACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAG-- 32590 ||| | ||| | || | | || | |||| ||||| | || ||||| ||| Sbjct 998 CTTCTTTTTCGTTGACAAATC--TAAGAGAACACG-ATTTGTGCAGTCAGTCAAGGAGTT 942 Query 32591 --TTTTTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCG 32648 |||| ||| ||||||||||| || || || || || |||||||||||||| || | Sbjct 941 TCTTTTAACA----TGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTG 886 Query 32649 GCAAAGGTGCCAACCCGGCGCTCGGTAACGGGGAGCGCGACGCGCACACGTACATTATTT 32708 ||||||| || ||||| | || || | | || || | | || | | || Sbjct 885 GCAAAGGCGCTAACCCTGACCTTGGGA--GTCCAG-AAGATGGTGATTGTTATGTAAGTT 829 Query 32709 TGTTACAAGAATTGCGTTCTATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTAC 32767 || | ||||||| ||| ||||| || || || ||| | | | || || | ||| Sbjct 828 TGATGAAAGAATTACGTGAGATGCTCGATGAACTCTCAGCT-AAGAATGGTAAGAAATAC 770 Query 32768 GAGTTGACTAGCGCAATTAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATGAAGC- 32826 || || ||| || ||||| || || || ||||| || || | || ||| Sbjct 769 GAATTAACTTCTGCTATTAGCGCTGGGTGGGATAAAATCCAAGTTGTTGACTA--CAGCA 712 Query 32827 -CGCGCAAAAGTACCTCGATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGT 32885 || ||||| || | ||| | || || | |||||||||||||| ||||| || |||| Sbjct 711 AGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAAGGTGCCTGGT 652 Query 32886 CTAACACCGAT----TTGGGCTATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGAT 32941 | || ||| |||| | |||| || | |||||||| || ||||| ||| | Sbjct 651 CAAA---TGATACTCTTGGAC-ATCAAACACCATTGTACGCGCCTGCATGGAACCCCAAG 596 Query 32942 GAATTGTACACCACAGATCACGCTGTTAAA---TTGTTAACAAGTCAAGGTGTAGCTTCT 32998 ||| ||||| | || || || ||| |||||| || || || || | || Sbjct 595 GAAACTTACACTTCTGACTTCGGAGTAAAATACTTGTTAGCA---CAGGGAGTGAATCCT 539 Query 32999 TACAAAATCATTGTCGGCATCGCCATGTACGGTCGCGGGTGGACGGGCGTGGCTGGTTAT 33058 | || || | || || | |||||||| ||||| || ||||| || || || ||| Sbjct 538 AAGAAGATTGTAGTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGAGTTCATGATTAC 479 Query 33059 GACGGCGATAAttttttttCGGGTACTGCGAAAGGCCCCATTTCGGGCACGTGGGAAAAC 33118 || | | | ||| || | || | || | || || | ||| || ||| || || Sbjct 478 GAAGACAACAATCCCTTCACAGGCAACGCTACTGGACCTGTCAAGGGTACTTGGCAAGAC 419 Query 33119 GGAGTTGTTGACTA 33132 ||||| || ||||| Sbjct 418 GGAGTGGTCGACTA 405 >seq32923 Length=5192 Score = 161 bits (178), Expect = 8e-35 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 109273 GAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAGGCCGGGTTTTATTAC 109332 || |||||||| ||||||| ||| | ||||| |||| ||||| || || || | ||| Sbjct 1723 GACTGGCCTCGCAGTTTGAAGCAGAAGCCCGAGGAACTCGCCGAAGCGGGATTCTTCTAC 1664 Query 109333 ACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGTTTGAAAGACTGGGAG 109392 || ||||||||||| ||||| || || || || ||||||||||| | || ||||||||| Sbjct 1663 ACCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGCCTCAAGGACTGGGAG 1604 Query 109393 GCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGTTGCCCTTACGTGTTG 109452 ||||| | ||||||| | | ||||||||| ||||| ||||| ||| | ||||| | Sbjct 1603 AACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTTCAG 1544 Query 109453 CTTGTTAAGGGTCGAGATTATGTGCAAAA 109481 || || ||||| ||||| ||||| || || Sbjct 1543 CTGGTCAAGGGCCGAGAGTATGTCCAGAA 1515 >seq54613 Length=3623 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||| |||||||||||||| || ||||| ||||||||||| | ||| || | Sbjct 2440 AAAATGCAGATTTTTGTCAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAAGCT 2499 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 ||| ||| ||| | | |||||| |||||| || || |||||| | || ||| Sbjct 2500 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 2559 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 || ||| | | |||| ||| || || ||||||||||||| | || | | || || Sbjct 2560 CAACAACGTTTGATTTTTGCTGGAAAGCAATTAGAAGATGGCCGTACACTTTCTGACTAC 2619 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| ||||| |||||||| | ||| | || || | ||||||| || Sbjct 2620 AACATCCAAAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGG 2669 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || || ||||| || || | ||| || || Sbjct 3346 ATGCAGATCTTTGTAAAGACACTTACAGGGAAAACAATCACTTTAGAAGTTGAAGCCTCT 3405 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | | |||||| ||||| || ||||| || |||| ||||||| Sbjct 3406 GATACAATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGTATCCCACCTGATCAG 3465 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | ||||| | ||| || || ||||||||||||| || | | || ||||| Sbjct 3466 CAGCGTCTTATCTTTGCTGGTAAGCAATTAGAAGATGGTCGCACACTATCTGACTATAAT 3525 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| || || | ||| |||| || | |||||||||| Sbjct 3526 ATTCAAAAAGAATCCACCCTTCATCTGGTACTGCGTCTGCGAGGAGG 3572 >seq2515 Length=4501 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| ||||| || || ||||| |||||||||||| | || ||| || Sbjct 3466 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTTGAGGTGGAAGCCTC 3525 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| ||| | | |||||| || || ||||| ||||| | || || || Sbjct 3526 TGATACTATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTATTCCACCAGACCA 3585 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| || | || | ||| || || || ||||||||| || || | |||||||| Sbjct 3586 GCAACGATTGATCTTTGCTGGTAAGCAGCTAGAAGATGGACGTACATTGTCTGATTATAA 3645 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 ||||||||| || || || | ||| | ||| || || | || ||||| || Sbjct 3646 CATTCAAAAGGAATCCACATTGCATCTTGTGCTGCGACTTCGCGGAGGTAA 3696 >seq37844 Length=1442 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG- 115344 ||||| |||||||| || || || || || ||||||||||| | || |||| |||| Sbjct 286 ATGCAGATTTTTGTTAAGACACTTACTGGGAAAACCATTACTTTAGAGGTGGAG-CCAGC 344 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||||| ||| | | || || || || || || || || | ||| ||||| Sbjct 345 CGACACTATTGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGTATTCCCCCAGATCA 404 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | ||||| | || ||||| ||| ||||||||| | ||| || | || || || Sbjct 405 ACAGCGTCTTATCTTCGCAGGCAAGCAACTAGAAGATGGCCGCACCCTGTCTGACTACAA 464 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||| ||||||||||||||| | ||| | ||| Sbjct 465 CATCCAAAAAGAGTCTACTCTGCATTTAGTG 495 >seq55701 Length=1651 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||||||||| || || || || || || || ||||| | ||| ||| | Sbjct 297 AATGCAAATTTTTGTAAAGACACTTACAGGCAAGACTATTACTTTGGAAGTGGAAGCTTC 238 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || || |||||| |||||||| ||| | ||| ||||| Sbjct 237 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 178 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||||||||||| ||| || || || | ||||||| || | | || || || Sbjct 177 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACTCTATCTGACTACAA 118 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||| ||||| |||||| | || |||| Sbjct 117 TATTCAGAAAGAATCTACTTTGCACCTGGT 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423499881344920