Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq55701 187 5e-42 seq2515 176 8e-39 seq54613 167 4e-36 seq37844 161 2e-34 seq35560 138 2e-27 seq54614 129 1e-24 seq110694 109 1e-18 seq10767 107 4e-18 seq110695 84.2 4e-11 >seq55701 Length=1651 Score = 187 bits (206), Expect = 5e-42 Identities = 181/233 (78%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || | |||||||| || ||||| | || || || || || || ||||| || | Sbjct 296 TTCCACCCCTAAGGCGCAGCACTAAGTGCAAAGTTGATTCCTTCTGAATATTATAGTCTG 355 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | ||| | ||||||||||| ||||| |||||||| || ||||||||||| || || | Sbjct 356 ACAATGTACGCCCATCTTCTAGTTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAG 415 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 ||||||| || ||||| |||||||||||||| ||| |||||| || || | | ||| | Sbjct 416 GAATGCCCTCTTTGTCCTGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCA 475 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||||| ||||||||||| || || | ||| || ||||| || ||||| ||| Sbjct 476 CTTCCAATGTGATGGTTTTCCCGGTTAAGGTTTTTACGAAGATTTGCATGATG 528 >seq2515 Length=4501 Score = 176 bits (194), Expect = 8e-39 Identities = 181/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 ||||| ||||||||||| |||| || | || | ||||| || ||||| ||||||||| Sbjct 3699 TAATTACCTCCGCGAAGTCGCAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTATAA 3640 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 || || | ||| | |||||||||| |||||| || || || || | || ||| ||||| Sbjct 3639 TCAGACAATGTACGTCCATCTTCTAGCTGCTTACCAGCAAAGATCAATCGTTGCTGGTCT 3580 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 |||||||| |||||||| ||||| ||||| || || || || || || || | | | Sbjct 3579 GGTGGAATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATAGTATCAGAGGCT 3520 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || || | ||| |||||||| ||||| |||||||||||||| || |||||| || Sbjct 3519 TCCACCTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTG 3463 >seq54613 Length=3623 Score = 167 bits (184), Expect = 4e-36 Identities = 178/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| ||| | || || || ||||| ||||||||||| || || || Sbjct 2669 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAA 2610 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||||||||| ||||| || || || || | | |||||| || || ||| Sbjct 2609 AGTGTACGGCCATCTTCTAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2550 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||||||||| || || || || || || || || | | ||| ||| Sbjct 2549 ATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCTTCAACT 2490 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTAT 68469 ||||| || |||||||| ||||| || || ||||| || ||||||||| || ||| Sbjct 2489 TCCAAAGTAATGGTTTTACCCGTAAGTGTTTTGACAAAAATCTGCATTTTGATAT 2435 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || |||| ||||| || || ||||| |||||||| || ||||| || || Sbjct 3572 CCTCCTCGCAGACGCAGTACCAGATGAAGGGTGGATTCTTTTTGAATATTATAGTCAGAT 3513 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||||||||| ||||| || || || || || | || || || ||||| Sbjct 3512 AGTGTGCGACCATCTTCTAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 3453 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || |||||||| || || || || || || || || || | | ||| ||| Sbjct 3452 ATACCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCAGAGGCTTCAACT 3393 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| ||||| || || || ||||| || || |||||||| Sbjct 3392 TCTAAAGTGATTGTTTTCCCTGTAAGTGTCTTTACAAAGATCTGCAT 3346 Score = 125 bits (138), Expect = 1e-23 Identities = 138/184 (75%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | ||| ||||| || |||||||| ||||||||||| || || || Sbjct 3344 CCTCCTCGCAGACGGAGTACTAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCCGAT 3285 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| || ||||| || || | ||||| || || ||| Sbjct 3284 AAGGTACGGCCATCTTCCAGTTGCTTGCCTGCGAAGATAAGACGCTGTTGATCTGGAGGA 3225 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| ||||| || || |||||||| | || ||||| Sbjct 3224 ATACCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCAATGGTGTCAGATGCCTCTACC 3165 Query 68415 TCCA 68418 |||| Sbjct 3164 TCCA 3161 Score = 120 bits (132), Expect = 6e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 68268 GACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCG 68327 || |||||||| || || || || || ||||| | ||||||||||| ||||| || || Sbjct 3080 GATTCTTTTTGAATATTGTAGTCAGATAGTGTGCGACCATCTTCTAATTGCTTACCAGCA 3021 Query 68328 AATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACG 68387 || || || | || || || ||||| ||||| || |||||||| || || || || || Sbjct 3020 AAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACA 2961 Query 68388 GCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTG 68447 || || || || | | ||| ||||| || ||||| ||||| || ||||| ||||| Sbjct 2960 TTTTCAATTGTATCAGAGGCTTCAACTTCTAAAGTGATTGTTTTCCCAGTGAGTGTCTTT 2901 Query 68448 ACGAATATCTGCAT 68461 || || |||||||| Sbjct 2900 ACAAAGATCTGCAT 2887 >seq37844 Length=1442 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || |||||||||||||| | || |||||||| || || || || |||| | Sbjct 284 CCTCCTCGGAGACGCAATACCAAGTGCAAAGTAGACTCTTTCTGAATATTGTAGTCGGCG 225 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | ||||||||| || ||| Sbjct 224 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGGTCTGGAGGA 165 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || |||||||| ||||| || || || || || ||||| | | ||| ||| Sbjct 164 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCCGAAGGTTCAACT 105 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 104 TCTAATGTGATTGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 58 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || || || || || ||||||||||||||||| || || || Sbjct 512 CCACCACGAAGACGAAGCACTAAATGCAGAGTAGACTCTTTTTGGATGTTGTAGTCAGAC 453 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||||| ||||| || ||||| || || | ||||| || || ||| Sbjct 452 AGGGTGCGGCCATCTTCTAGTTGCTTGCCTGCGAAGATAAGACGCTGTTGATCTGGGGGA 393 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| ||||| || || || ||||| |||| || || Sbjct 392 ATACCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCAATAGTGTCGGCTGGCTCCACC 333 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || |||||||| || || || ||||| || || |||||||| Sbjct 332 TCTAAAGTAATGGTTTTCCCAGTAAGTGTCTTAACAAAAATCTGCAT 286 >seq35560 Length=9305 Score = 138 bits (152), Expect = 2e-27 Identities = 197/276 (71%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 268223 ACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGC 268282 || |||||||| ||| | ||| ||||| |||||| || || || ||||| ||| Sbjct 1615 ACGAAGTCCTCGGGCGCGTCCTGCTGCAGCATGAGCCACATGGCCTCCACGTAGTCGCGC 1674 Query 268283 GCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTG--- 268339 ||||||||||| |||||||| ||| | ||| ||||| ||| | | | || Sbjct 1675 GCATGGCCCCAGTCGCGCTTGCTGTCGAGGTTACCGAGCTCGAGG---TGCGACATGAGG 1731 Query 268340 CCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGT 268399 ||||| | | || | || || ||||| || || ||||| || |||| || || Sbjct 1732 CCGAGATGTATCTTGGCGACGCCCCGCGTGATCTTGCGCGTCACAAAGTTCTCTCCGCGG 1791 Query 268400 AGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGG 268459 | ||||||||||||||||| || | ||||||||||||||||||||| || ||||| ||| Sbjct 1792 CGCGGGCTCTCGTGGTTGAACAGCAGGCCGTTGCACGCGAACATGCCGTACGCCTCGCGG 1851 Query 268460 TAGTTCACGACCGTCCAGTATGCAAACATCTTTGCA 268495 ||||| || || ||||||| | ||| ||| ||| Sbjct 1852 TAGTTTACTACTATCCAGTAGCCGTACAGCTTCGCA 1887 >seq54614 Length=296 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || |||||||||||||| | || |||||||| || || || || |||| | Sbjct 106 CCTCCTCGGAGACGCAATACCAAGTGCAAAGTAGACTCTTTCTGAATATTGTAGTCGGCG 165 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | ||||||||| || ||| Sbjct 166 AGCGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATTAGACGTTGTTGGTCTGGAGGA 225 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || |||||||| ||||| || || || || || ||||||| | ||| ||| Sbjct 226 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAAGGTTCAACT 285 Query 68415 TCCAAGGTGAT 68425 || || ||||| Sbjct 286 TCTAATGTGAT 296 >seq110694 Length=236 Score = 109 bits (120), Expect = 1e-18 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 ||||| || ||||| | || || || || ||||| ||||| || || | ||| | ||| Sbjct 67 CGCAACACTAAGTGCAAAGTTGATTCCTTCTGGATATTATAGTCAGACAATGTGCGGCCA 126 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| | ||||| || || || || || || |||||||| || ||||| ||||| ||| Sbjct 127 TCTTCGAGTTGCTTTCCAGCAAAAATCAGCCTCTGTTGGTCTGGAGGAATACCTTCTTTG 186 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTC 68416 || |||||||||||||| || ||||| || || | | ||| ||||| Sbjct 187 TCCTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCACTTC 236 >seq10767 Length=4660 Score = 107 bits (118), Expect = 4e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 68337 CTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATG 68396 || || ||||| || ||||| || || || ||||| ||||| |||||||| ||||||| Sbjct 3874 CTCTGCTGGTCTGGGGGAATTCCCTCTTTATCTTGGATCTTGGCCTTGACATTCTCGATG 3815 Query 68397 GTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456 ||||| || | ||| || || | ||||||||| || ||||| || || || ||||| ||| Sbjct 3814 GTGTCCGCGGGTTCGACCTCAAGGGTGATGGTCTTACCCGTCAGTGTTTTCACGAAAATC 3755 Query 68457 TGCATTATG 68465 ||||| ||| Sbjct 3754 TGCATGATG 3746 >seq110695 Length=218 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || | || ||||| || ||||| | || || || || ||||| ||||| |||| Sbjct 95 TTCCACCTCTTAGACGCAACACTAAGTGCAAAGTTGATTCCTTCTGGATATTATAGTCGG 154 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | ||| | ||||||||| | ||||| || || || || ||||||||||| || || | Sbjct 155 ACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCAAAAATCAGTCTTTGTTGATCTGGAG 214 Query 68353 GAAT 68356 |||| Sbjct 215 GAAT 218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917524164072520