Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq54660 84.2 5e-13 >seq54660 Length=2692 Score = 84.2 bits (92), Expect = 5e-13 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||||||| ||||| ||||| | | | || ||| || || |||||||| ||||||| Sbjct 1464 ACCCCATGGCCCGAGTATTTCCTAAAGTTACAAAATGCACATTCCACAAATATGGTCCTT 1523 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 | || || || | || | ||| ||||| || | || || ||| | || || |||| Sbjct 1524 CAGGAACCGTGCAGAAGTTCGACGGACTGTGTGTACTACCATTGAATATTGTAAATGAGA 1583 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480 ||||||| | ||||| |||||||||||| Sbjct 1584 AGATCTATGTATTCCTATGGTTCTGGTTC 1612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12431441353500