Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq83301 93.3 4e-14 >seq83301 Length=2719 Score = 93.3 bits (102), Expect = 4e-14 Identities = 157/226 (69%), Gaps = 1/226 (0%) Strand=Plus/Plus Query 20233 TCTAAGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAA 20292 ||||| | |||| | |||||||| ||||| ||| || || | ||| || || || || || Sbjct 646 TCTAA-ATCAGTCAGATGAGCAATCATATGAGTCAATAGAGCATAACTAGCTATATTGAA 704 Query 20293 AGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTC 20352 |||||| || | |||||| ||| | || || |||| | |||| ||||||| || Sbjct 705 AGGAACACCAAGACCCATATCTGCACTTCTTTGGTACATCAGACACGAAAGCTTTCCACT 764 Query 20353 AGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGC 20412 | ||||| || || ||| ||||||| || ||||| ||||| || || | Sbjct 765 GGATACATGGAACTGTACTAAGCAGTGACATGGAGGAAGTGCCATTTTGCTTAAATCTGA 824 Query 20413 CGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTT 20458 || ||||| ||||| | | ||||||||||| ||||||||| Sbjct 825 GGGATTCCATGCACATACCAACATTCTTCTATCACTTGGATTATTT 870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 439410119984440