Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq121238 288 1e-72 seq37844 118 1e-21 seq2515 111 2e-19 seq234333 107 2e-18 seq54613 98.7 1e-15 seq55701 95.1 1e-14 seq177858 93.3 5e-14 seq53601 91.5 2e-13 seq53602 87.8 2e-12 seq218814 86.0 7e-12 seq111469 86.0 7e-12 seq82191 86.0 7e-12 seq54614 86.0 7e-12 seq36464 86.0 7e-12 seq8828 86.0 7e-12 >seq121238 Length=2101 Score = 288 bits (318), Expect = 1e-72 Identities = 813/1236 (66%), Gaps = 41/1236 (3%) Strand=Plus/Minus Query 94966 AAAGTGACGGGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGAC 95025 ||||| ||| |||||||| ||||||||||| || || | | || || || | ||| Sbjct 1369 AAAGTTGTGGGTGCTTATTTCGTAGAATGGGGTGTTTATCCTAGGAAATTCCCTGTGGAT 1310 Query 95026 AAGGTGCCCATTCCCAATCTGACGCATCTATTGTACGGTTTCATACCCATTTGCGGAGGC 95085 | || || || ||||| || |||||| | ||||| ||||| || |||||||| || Sbjct 1309 CGTATACCTATACCTAATCTTACTCATCTACTCTACGGCTTCATTCCAATTTGCGGCGGT 1250 Query 95086 GACGGTATCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCA 95145 ||||||||||| ||||| ||||| || | ||| ||| | || ||||| ||| Sbjct 1249 GACGGTATCAATGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCATTACAGCGATCT 1190 Query 95146 TGTGCCGGCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAA 95205 ||| |||| | || |||||||| || ||||| || | | || |||||||| Sbjct 1189 TGTAGCGGCCGCGAGGATTTCAAAGTCTCAATCCATGATCCATGGGCAGCATTACAAAAA 1130 Query 95206 CCGCAAAAAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATG 95265 || |||| ||| | || || |||||||| ||| |||||||||||||| | ||| Sbjct 1129 CCACAAAGAGGATTGTCTTCATGGAATGAACCCTACAAAGGCAATTTTGGCCAATTGATG 1070 Query 95266 GCTATTCGCAAACA---TAATCCTCATTTGAAAATTTTGCCTAGCATCGGTGGTTGGACA 95322 | || |||||| || ||||||| ||| | || || ||||| ||||| Sbjct 1069 TC---TCTCAAACAAGCCCGACCCGATTTGAAGATTCTTCCCTCTATTGGTGGGTGGACG 1013 Query 95323 CTGAGCGACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACTCT 95382 || || || |||| ||||||| ||| | | ||| ||| | ||||||| | || Sbjct 1012 CTTGCTGATCCATTCTTCTTTTTCGTTGACAAATCTAAGAGAACACGATTTGTGCAGTCA 953 Query 95383 GTTCGTGA-ATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGTT 95441 || || ||||| || ||||| || |||||||| || || ||||| |||||||| Sbjct 952 GTCAAGGAGTTTCTTTTAA-CATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTT 894 Query 95442 TCCCGGCGGAAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACATA 95501 || || || || || || ||||| ||| | || ||| | ||||| | || Sbjct 893 CCCTGGTGGCAAAGGCGCTAACCCTGACCTTGGGAGTCC---AGAAGATGGTGATTGTTA 837 Query 95502 TGTAACTCTATTGAAAGAACTACGCCTAATGCTAGACGAA-------CTGGGTGTGGTGA 95554 ||||| | | |||||||| |||| ||||| || ||| || | |||| | Sbjct 836 TGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAACTCTCAGCTAAGAATGGT-A 778 Query 95555 ACAAACGCGTGTACGAGTTGACCAGCGCCGTGGGAGCGGGCTACGATAAAATAGACGTGA 95614 | ||| ||||| || || || | | || || | |||||||| | || Sbjct 777 AGAAA------TACGAATTAACTTCTGCTATTAGCGCTGGGTGGGATAAAATCCAAGTTG 724 Query 95615 TAGATTACTCTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTTA 95674 | || ||| |||| | ||| |||||||| | || || |||||||||||||| | Sbjct 723 TTGACTACAGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCA 664 Query 95675 AAGGCGCATGGTCCAACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGGA 95734 |||| || ||||| || | | || |||||||||||||||||||| ||| | |||| Sbjct 663 AAGGTGCCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGA 604 Query 95735 ACCCTGACGACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTTAAGCAAA--AAGT 95792 |||| | || | ||||| |||||| | |||||| | || | |||| | ||| Sbjct 603 ACCCCAAGGAAACTTACACTTCTGACTTCGGAGTAAAATACTTG--TTAGCACAGGGAGT 546 Query 95793 ACCTTCCAACAAAATTGTTGTGGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCA 95852 | | || || ||||| || || || |||||||| || | || |||| ||| || || Sbjct 545 GAATCCTAAGAAGATTGTAGTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGAGTTCA 486 Query 95853 CGATTACAAAAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGCACATG 95912 |||||| || |||| || || || ||| ||| || || || || || || || || Sbjct 485 TGATTACGAAGACAACAATCCCTTCACAGGCAACGCTACTGGACCTGTCAAGGGTACTTG 426 Query 95913 GGAAAACGGTGTCGTCGATTATAGGCAAGTT---AACGATTTTAAAAACAGTCCAGCTTA 95969 | || |||| || ||||| || ||| || || || || || | || | || | Sbjct 425 GCAAGACGGAGTGGTCGACTACAGGGAAATTGCCAATGAAGTTGCTCA-AGGCAAG-TGG 368 Query 95970 CACTTACGCTTACGACAAAGTGGCCGAGGCGCCGTACGTTTACGGCGGATCCGACCAGGC 96029 | || | ||||||||| || ||| | || || ||||| | | | ||| | | || Sbjct 367 GAGTT-CCATTACGACAATGTCGCCCAAGCACCTTACGTCTTCAGACCATC--AACTGG- 312 Query 96030 GTTGGATCTGATTTCTTACGACGACACGTCGTCGGTATTAGCCAAAGGCGATTACGTGTT 96089 || || | | || || | | || || | | || || | || || Sbjct 311 ---AGACCTTGTAACCTATGATAATGCTAGATCAGTTATTGAGAAGGGTAAGTATGTAAG 255 Query 96090 ACAGAATAATTTAGGTGGTTTGTTTGCATGGGAAATAGATGCCGATAATGGTGATTTGTT 96149 | | || || |||| ||| | ||||| |||||||| || |||||||| |||||| | | Sbjct 254 AAATAACAAGCTAGGCGGTCTCTTTGCTTGGGAAATCGACGCCGATAACGGTGATCTACT 195 Query 96150 AAACGCCATGAACACAGGTCTGGGCAACAGCCCTGC 96185 || |||||||||| ||||| |||||||| || || Sbjct 194 GAATGCCATGAACATGGGTCTCGGCAACAGTCCGGC 159 >seq37844 Length=1442 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||||| | |||||| ||||| ||||| || ||| || ||||||||||| || || Sbjct 285 ACCTCCTCGGAGACGCAATACCAAGTGCAAAGTAGACTCTTTCTGAATATTGTAGTCGGC 226 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || ||||||||||||||||| || || || || ||||| | || Sbjct 225 GAGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGGTCTGGAGG 166 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||| ||||| ||| || ||| | | | | ||||| | ||| || Sbjct 165 AATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCCGAAGGTTCAAC 106 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| ||||| || || || |||||||||||||| ||||| Sbjct 105 TTCTAATGTGATTGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 58 >seq2515 Length=4501 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | |||| ||| | |||||||||| ||||||||||| || ||||||| Sbjct 3694 ACCTCCGCGAAGTCGCAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTATAATCAGA 3635 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || ||||||||||||||||| || || | ||| |||||||| | ||| Sbjct 3634 CAATGTACGTCCATCTTCTAGCTGCTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGG 3575 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||| || ||| || ||| | | | | || || | |||||| Sbjct 3574 AATACCTTCCTTATCTTGGATCTTAGCTTTTACATTTTCAATAGTATCAGAGGCTTCCAC 3515 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | || |||||||| ||||| || ||||| || || ||||||||| Sbjct 3514 CTCAAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 3466 >seq234333 Length=992 Score = 107 bits (118), Expect = 2e-18 Identities = 87/103 (84%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 56988 AACGTTTATGAAAAAT--TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGAC 57045 ||| | ||| ||||| ||||||| |||| | |||||||||| ||||||||||||||| Sbjct 857 AACTTATATAAAAAAAGATTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGAC 798 Query 57046 AGGCGGACATACTCACCACTATACTACCGAGGAT-TGAATATA 57087 |||||| ||||| |||||||||||||||||||| |||| ||| Sbjct 797 AGGCGGGGATACTTACCACTATACTACCGAGGATATGAACATA 755 >seq54613 Length=3623 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||| | ||||| |||| ||| | ||| || ||||||||||| || |||| Sbjct 3572 CCTCCTCGCAGACGCAGTACCAGATGAAGGGTGGATTCTTTTTGAATATTATAGTCAGAT 3513 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || |||| ||||||||||| || || || |||||||| || | ||| Sbjct 3512 AGTGTGCGACCATCTTCTAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 3453 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | ||| ||||| |||||| ||| | | | | || || | ||| || Sbjct 3452 ATACCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCAGAGGCTTCAACT 3393 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| ||||| || || || |||||||||||||| ||||| Sbjct 3392 TCTAAAGTGATTGTTTTCCCTGTAAGTGTCTTTACAAAGATCTGCAT 3346 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || |||||||||||||| |||| || || || | || |||| ||||||||||| || Sbjct 3077 TCTTTTTGAATATTGTAGTCAGATAGTGTGCGACCATCTTCTAATTGCTTACCAGCAAAG 3018 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || |||||||| || | ||| | || ||| ||||| |||||| ||| | | Sbjct 3017 ATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTT 2958 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | || || | ||| || || | ||||| ||||| || || || ||||||||| Sbjct 2957 TCAATTGTATCAGAGGCTTCAACTTCTAAAGTGATTGTTTTCCCAGTGAGTGTCTTTACA 2898 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 2897 AAGATCTGCAT 2887 >seq55701 Length=1651 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||| ||| || ||||| || ||||| |||||||| || || | || || ||| | Sbjct 310 CGCAGCACTAAGTGCAAAGTTGATTCCTTCTGAATATTATAGTCTGACAATGTACGCCCA 369 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || ||||| ||||| || ||||| || |||| || || || | || | || ||| ||| Sbjct 370 TCTTCTAGTTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGAATGCCCTCTTTG 429 Query 42114 TCCATGATTTTTTGTTTGAGCGT-CGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| | |||| | ||| | | | || || | |||||| || | ||||| Sbjct 430 TCC-TGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGTGAT 488 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| || |||| || ||||| ||||||||||| Sbjct 489 GGTTTTCCCGGTTAAGGTTTTTACGAAGATTTGCAT 524 >seq177858 Length=921 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 417 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 476 Query 57066 ATACTACCGAGGATTG 57081 |||||||||| ||||| Sbjct 477 ATACTACCGAAGATTG 492 >seq53601 Length=450 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 198 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 257 Query 57065 TATACTACCGAGGAT 57079 ||||||||||| ||| Sbjct 258 TATACTACCGAAGAT 272 >seq53602 Length=266 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 6 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 65 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 66 CCGAAGAT 73 >seq218814 Length=373 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 6 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTA 65 Query 57072 CCGAGGATTG 57081 |||| || || Sbjct 66 CCGAAGACTG 75 >seq111469 Length=1218 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 6 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 65 Query 57072 CCGAGGATTG 57081 |||| || || Sbjct 66 CCGAAGACTG 75 >seq82191 Length=323 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 6 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTA 65 Query 57072 CCGAGGA 57078 |||| || Sbjct 66 CCGAAGA 72 >seq54614 Length=296 Score = 86.0 bits (94), Expect = 7e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||||| | |||||| ||||| ||||| || ||| || ||||||||||| || || Sbjct 105 ACCTCCTCGGAGACGCAATACCAAGTGCAAAGTAGACTCTTTCTGAATATTGTAGTCGGC 164 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || |||||||||||||| || || || || || ||||| | || Sbjct 165 GAGCGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATTAGACGTTGTTGGTCTGGAGG 224 Query 42101 CACGCTCTCCTTGTC 42115 | | ||| ||||| Sbjct 225 AATACCCTCTTTGTC 239 >seq36464 Length=373 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 368 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTA 309 Query 57072 CCGAGGATTG 57081 |||| || || Sbjct 308 CCGAAGACTG 299 >seq8828 Length=1219 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 1214 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 1155 Query 57072 CCGAGGATTG 57081 |||| || || Sbjct 1154 CCGAAGACTG 1145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540797261691440