Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq7548 93.3 5e-14 >seq7548 Length=2633 Score = 93.3 bits (102), Expect = 5e-14 Identities = 203/301 (67%), Gaps = 6/301 (2%) Strand=Plus/Minus Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 116373 || |||||||| || ||| || || | |||| ||||| ||||||| ||||||||| Sbjct 1450 ACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTGACAATTTTTGTGATT 1391 Query 116374 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 116433 || | | |||| ||| ||| ||| | | |||| ||| || | ||| || Sbjct 1390 TCTTTTAATTTTTTAAAATTAAAT-TGCT--TATGTTCA---ACAAACATGTTAAGTGCT 1337 Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || || ||||| || || | ||||| | |||||| | | || || || Sbjct 1336 ATGGAAGCAAGATTGCATACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTG 1277 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 || | ||| || ||||| ||||| | ||||||||||| ||| ||||||| ||| Sbjct 1276 CAAAGATTGCTACATTTAATAGTGCCAAGATTCTTTTGATTACTCTTCCTGTTACAAGCA 1217 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAT 116613 ||||| || | ||| ||||| || || |||||| ||||| | | ||| | ||||||| Sbjct 1216 TCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTCCAT 1157 Query 116614 A 116614 | Sbjct 1156 A 1156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610779079189560