Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq121238 194 2e-44 seq37844 95.1 1e-14 seq55701 91.5 2e-13 >seq121238 Length=2101 Score = 194 bits (214), Expect = 2e-44 Identities = 644/990 (65%), Gaps = 39/990 (4%) Strand=Plus/Minus Query 98734 AAAGTTACGGGGGCTTATTTTGTAGAATGGGGTGTTTACGATCGCAAATTTCCAGCAGAT 98793 |||||| ||| |||||||| ||||||||||||||||| | | ||||| || | ||| Sbjct 1369 AAAGTTGTGGGTGCTTATTTCGTAGAATGGGGTGTTTATCCTAGGAAATTCCCTGTGGAT 1310 Query 98794 AAAGTGCCTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGC 98853 | ||||| || ||| | || || || | || || || || || |||||||| || Sbjct 1309 CGTATACCTATACCTAATCTTACTCATCTACTCTACGGCTTCATTCCAATTTGCGGCGGT 1250 Query 98854 GACGGTATAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCG 98913 |||||||| || ||||| ||||| | | || ||| | | ||||| ||| Sbjct 1249 GACGGTATCAATGACAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCATTACAGCGATCT 1190 Query 98914 TGCGATAAGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAA 98973 || | || |||||||| || ||||| ||| | | || |||| ||| Sbjct 1189 TGTAGCGGCCGCGAGGATTTCAAAGTCTCAATCCATGATCCATGGGCAGCATTACAAAAA 1130 Query 98974 CCACAACAGGG--TGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTA 99031 |||||| || ||||| | | || || || ||| |||||||| || || | | Sbjct 1129 CCACAAAGAGGATTGTCTTCA--TGGAATGAACCCTACAAAGGCAATTTTGGCCAATTGA 1072 Query 99032 TGGC---CATACGTAAACACAACCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGA 99088 || | || || || | | |||| || | || || || ||| ||| ||||| |||| Sbjct 1071 TGTCTCTCAAAC--AAGCCCGACCCG-ATTTGAAGATTCTTCCCTCTATTGGTGGGTGGA 1015 Query 99089 CTCTTAGCGACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACT 99148 | ||| || || |||| ||||||| || | | ||| | | | || || | | Sbjct 1014 CGCTTGCTGATCCATTCTTCTTTTTCGTTGACAAATCTAAGAGAACACGATTTGTGCAGT 955 Query 99149 CGGTTCGTGAATTCCT----ACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGG 99204 | || || || || ||| |||||||| ||||| ||||| || ||||| ||| Sbjct 954 CAGTCAAGGAGTTTCTTTTAACA----TGGAAATTCTTCGATGGTGTTGATATCGATTGG 899 Query 99205 GAGTTTCCTGGCGGAAAGGGGGCCAACCCTGAAGTAGGAAATCCTAATGAGGACGGAAAC 99264 ||||| ||||| || || || || |||||||| | || | ||| || || || | Sbjct 898 GAGTTCCCTGGTGGCAAAGGCGCTAACCCTGACCTTGGGAGTCCA---GAAGATGGTGAT 842 Query 99265 ACTTATGTCACACTTCTGCAAGAGCTTCGTTTGATGCTTGACGAATTGGGTGTGGCCAAT 99324 |||||| | | || |||| | ||| |||||| || ||| | | | || Sbjct 841 TGTTATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAACTCTCAG---CTAAG 785 Query 99325 AAACGTGTT---TACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTG 99381 || || |||||| | || ||| | |||| || | ||||||||| | || Sbjct 784 AATGGTAAGAAATACGAATTAACTTCTGCTATTAGCGCTGGGTGGGATAAAATCCAAGTT 725 Query 99382 GTCGATTACTCTACAGCCAG--TCAATATT---TGGACCATGTGTTTTTAATGAGTTACG 99436 || || ||||||| || |||| ||| |||| ||| | || || |||||||||| Sbjct 724 GTTGA-----CTACAGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACG 670 Query 99437 ATTTTAAAGGCGCCTGGTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCA 99495 | || ||||| |||||||| || ||| | || ||||||||||||||||| || || Sbjct 669 ACTTCAAAGGTGCCTGGTCAAATGAT-ACTCTTGGACATCAAACACCATTGTACGCGCCT 611 Query 99496 TCGTGGAACTCCGAAGAGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAA 99555 | |||||| || | || | ||||| | || | | || ||| | | ||| | Sbjct 610 GCATGGAACCCCAAGGAAACTTACACTTCTGACTTCGGAGTAAAATACTTGTTAGCACAG 551 Query 99556 AAAGTGCCTTCTCACAAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGA 99615 |||| | || | ||||||||||| || || |||||||| || | || |||| |||| Sbjct 550 GGAGTGAATCCTAAGAAGATTGTAGTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGA 491 Query 99616 GTGCATGACTACAAAAATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGC 99675 || ||||| ||| || | || || || || || || || ||||| || || || Sbjct 490 GTTCATGATTACGAAGACAACAATCCCTTCACAGGCAACGCTACTGGACCTGTCAAGGGT 431 Query 99676 ACCTGGGAAAACGGTGTTGTTGATTATAGG 99705 || ||| || |||| || || || || ||| Sbjct 430 ACTTGGCAAGACGGAGTGGTCGACTACAGG 401 >seq37844 Length=1442 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | |||||| |||| ||||| ||| ||| || || ||||||||||||| Sbjct 284 CCTCCTCGGAGACGCAATACCAAGTGCAAAGTAGACTCTTTCTGAATATTGTAGTCGGCG 225 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || |||||||| || ||||| || | || || ||||| | || Sbjct 224 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGGTCTGGAGGA 165 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| ||||| |||||| || | | | | ||||| | ||| || Sbjct 164 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCCGAAGGTTCAACT 105 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| ||||| || || || || || |||||||| ||||| Sbjct 104 TCTAATGTGATTGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 58 >seq55701 Length=1651 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||| | ||||| ||||| ||| || || || ||||||||||| ||| Sbjct 70 CCACCTCTCAGACGTAGTACCAGGTGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 129 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 |||||||| | || || |||||||| || || || || | | ||||| || | || Sbjct 130 AGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 189 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || ||| || ||| ||| | | | | || || | |||||| Sbjct 190 ATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 249 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||| || || || ||||| || || || || ||||| ||||||||| Sbjct 250 TCCAAAGTAATAGTCTTGCCTGTAAGTGTCTTTACAAAAATTTGCATT 297 Score = 82.4 bits (90), Expect = 9e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||| | ||||| || ||||| || ||||| ||||| || | || ||| | Sbjct 310 CGCAGCACTAAGTGCAAAGTTGATTCCTTCTGAATATTATAGTCTGACAATGTACGCCCA 369 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || || ||||| |||||||| || | | || || || | || | || ||| ||| Sbjct 370 TCTTCTAGTTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGAATGCCCTCTTTG 429 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| ||| | || | | || || | |||||| |||| |||||| Sbjct 430 TCCTGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATG 489 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || | ||||| || ||||||||||| Sbjct 490 GTTTTCCCGGTTAAGGTTTTTACGAAGATTTGCAT 524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562724919079320