Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq49004 136 4e-27 seq37844 120 3e-22 seq128805 104 2e-17 seq33674 102 8e-17 seq54613 95.1 1e-14 seq74909 89.7 5e-13 seq55701 89.7 5e-13 seq166 89.7 5e-13 seq128806 87.8 2e-12 seq54614 87.8 2e-12 seq64186 82.4 8e-11 >seq49004 Length=3997 Score = 136 bits (150), Expect = 4e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| ||||| ||||| ||||| |||||||||||||| |||||||| || || ||||||| Sbjct 311 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTT 252 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | | ||||||||| | || || |||||||| || || | ||||| || ||||| |||| Sbjct 251 TCAACCAAAATATTGAAGCAAAGCTGCCCGAGAAAAATATTCCCTCAACCGCCGCAAAAG 192 Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096 | | | || || | || ||||| ||||| | ||||| ||| ||||| || | Sbjct 191 CGATTATACGTTCTGCAAATGTGGCCGTCTTGCTACCAATCCACTGCAATGCCCAGTCTG 132 Query 133097 CCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAA 133139 |||| | || || ||||| | || || || || || ||||| Sbjct 131 CCTTCTTCTTAACACACGGTAGAGTCTCAATAGCATTGAACAA 89 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 |||||| || | || |||||||| || || || |||||||| || || ||||| || || Sbjct 2085 CATCACTCCCCACTTCTGATATTCTCCTACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTC 2026 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCT 132700 ||| || ||||| |||||||||| || || || ||||||||||||| Sbjct 2025 CAATGAGATGAGATTCATAAAATCAAATGGATTCTGCGTGTTGTAGTGCT 1976 >seq37844 Length=1442 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || |||||||| || | || || ||| | || Sbjct 286 ATGCAGATTTTTGTTAAGACACTTACTGGGAAAACCATTACTTTAGAGGTGGAGCCAGCC 345 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| |||| | || |||| ||||| ||||| |||||| | || ||| Sbjct 346 GACACTATTGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGTATTCCCCCAGATCAA 405 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| || || || || | |||||||| ||||||||| Sbjct 406 CAGCGTCTTATCTTCGCAGGCAAGCAACTAGAAGATGGCCGCACCCTGTCTGACTACAAC 465 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| || | || |||||||| ||||| ||| Sbjct 466 ATCCAAAAAGAGTCTACTCTGCATTTAGTGCTTCGT 501 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || ||||| || ||||| || ||||| ||||| | || || || | | Sbjct 58 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACAATCACATTAGAAGTTGAACCTTCG 117 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| |||||| || |||| ||||||||||| ||||| | |||||| Sbjct 118 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCTCCAGACCAA 177 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || |||| ||| || || |||||||| || | || || ||| ||||||||| Sbjct 178 CAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTCTCGCCGACTACAAT 237 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || || || | || |||| ||||| ||||| | |||| || Sbjct 238 ATTCAGAAAGAGTCTACTTTGCACTTGGTATTGCGTCTCCGAGGAGG 284 >seq128805 Length=613 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 126661 CGGAATAGTTGGCCGGGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGCCTCACGGG 126720 |||| |||||||||||||| | || || ||||| ||||||||| ||| | || | | Sbjct 253 CGGAGTAGTTGGCCGGGTGCGCTCCGCCACAGTTTGCGCACGTAGCGGGCTCTTCCAGAG 312 Query 126721 GGCGGCTACAGTGCATGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGCGGTCGGT 126780 |||| |||| || || || ||||||||| ||| ||||| || | |||| Sbjct 313 GGCGCGGGCAGTCGCGCGCAAGATGCTCTTCTCCGCATCTCACGCAGGCCAGGCGACGGT 372 Query 126781 GACAGTGATGGCTGCTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGGCGGCGCT 126840 | || |||||| ||| | ||| ||||||||||| || ||||| |||| | || Sbjct 373 GGCACCCATGGCTTGAGTGCCTAAACGCCTGGCAGCGATGGCACTGCGCCGGGCCCCTCT 432 Query 126841 TGCCGCGCCACGCCTCAATGATGACGCCGGTGATGCCAAGCAATTCCGTCAC 126892 ||| ||||| || || |||||||| || | |||| | || |||||||| Sbjct 433 TGCTCCGCCAAGCTTCTATGATGACCCCAGGCATGCACAACAGCTCCGTCAC 484 >seq33674 Length=2731 Score = 102 bits (112), Expect = 8e-17 Identities = 194/283 (69%), Gaps = 2/283 (1%) Strand=Plus/Plus Query 126617 GCCCGCACGCCGATTCCGGGCCTCACGTT-GAATAACGGGGCAACCGGAATAGTTGGCCG 126675 |||||| |||||||| || ||||| |||| |||| ||| || | || | ||| || | Sbjct 1940 GCCCGCCCGCCGATTGCGTGCCTCGCGTTTGAATTGAGGG-CACGCTGAGTGGTTCGCGG 1998 Query 126676 GGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGCCTCACGGGGGCGGCTACAGTGCA 126735 | ||||| || || |||||| ||| || ||||| | || | || || ||||| Sbjct 1999 GATGGGGACCCCCACAGTTGACGCAGGTTGCCGGGGAGTCTCTAGGTCGCGGACAGTCGC 2058 Query 126736 TGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGCGGTCGGTGACAGTGATGGCTGC 126795 |||| ||| || | ||||| | ||| || || | | | | ||| ||| |||||| Sbjct 2059 GGGCGAGGTGCTCCTCGCCGCACCTCACGCACGCTATCCGCCTGTGGCAGCCGTGGCTGG 2118 Query 126796 TGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGGCGGCGCTTGCCGCGCCACGCCT 126855 ||| || || ||||||||||| |||||||| |||| | ||||| | || |||| Sbjct 2119 AGTGGCGGAAGCCCTGGCAGCGATGGCATTGCGCCGGGCCCCTCTTGCTCCTACATGCCT 2178 Query 126856 CAATGATGACGCCGGTGATGCCAAGCAATTCCGTCACTTGGTA 126898 |||| || || |||| || ||| | ||| || | || ||| Sbjct 2179 CAATAATCACTCCGGGCATATTAAGAAGTTCTGTGATTTCGTA 2221 >seq54613 Length=3623 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || || || ||||| || ||||| |||||||| || | || || || || Sbjct 2440 AAAATGCAGATTTTTGTCAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAAGCT 2499 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||| | | ||| | |||| ||||| | ||||| || || ||||| | || Sbjct 2500 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 2559 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| || | |||| || || || || | || || | || || || |||||| Sbjct 2560 CAACAACGTTTGATTTTTGCTGGAAAGCAATTAGAAGATGGCCGTACACTTTCTGACTAC 2619 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||||| | || || ||| | || |||||| || |||| || Sbjct 2620 AACATCCAAAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGG 2669 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || ||||| || || || || ||||| ||||| | || || || ||| | Sbjct 3346 ATGCAGATCTTTGTAAAGACACTTACAGGGAAAACAATCACTTTAGAAGTTGAAGCCTCT 3405 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | ||| | |||| ||||||| ||||||||||| || || | || || Sbjct 3406 GATACAATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGTATCCCACCTGATCAG 3465 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || || || || | || || | ||||| || ||||| || Sbjct 3466 CAGCGTCTTATCTTTGCTGGTAAGCAATTAGAAGATGGTCGCACACTATCTGACTATAAT 3525 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| ||| | || || ||| |||| |||||| || |||| ||| Sbjct 3526 ATTCAAAAAGAATCCACCCTTCATCTGGTACTGCGTCTGCGAGGAGGC 3573 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 38289 GACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGA 38348 || || ||||| | |||| | | ||| |||| | || |||| ||||| ||||| Sbjct 3163 GAGGTAGAGGCATCTGACACCATTGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGT 3222 Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 ||||| | || |||||||| || || | ||| ||||| || ||||| || | || ||| Sbjct 3223 ATTCCTCCAGATCAACAGCGTCTTATCTTCGCAGGCAAGCAACTGGAAGATGGCCGTACC 3282 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGC 38468 | |||||||||||||||||||| | || || || || || || ||| || |||| Sbjct 3283 TTATCGGACTACAACATCCAAAAGGAGTCCACCCTTCACTTAGTACTCCGTCTGCGAGGA 3342 Query 38469 GG 38470 || Sbjct 3343 GG 3344 >seq74909 Length=1986 Score = 89.7 bits (98), Expect = 5e-13 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 126654 GGGCAACCGGAATAGTTGGCCGGGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGCC 126713 ||||| |||| |||||||||||||| | || || |||||| ||| || || || | Sbjct 178 GGGCATGCGGAGTAGTTGGCCGGGTGCGCACCGCCACAGTTGGCGCATGTCGCGGGTTCT 237 Query 126714 TCACGGGGGCGGCTACAGTGCATGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGC 126773 || | ||||| |||| || || || ||||||||| ||| ||||| || Sbjct 238 TCTAGAGGGCGCGGGCAGTCGCGCGCAAGATGCTCTTCTCCGCATCTCACGCAGGCCAGG 297 Query 126774 GGTCGGTGACAGTGATGGCTGCTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGG 126833 | |||||||| ||||| ||| | ||| |||||||||||||| ||||| ||| Sbjct 298 CGACGGTGACACCCGTGGCTTGAGTGCCTAAACGCCTGGCAGCGATGACACTGCGCCGGG 357 Query 126834 CGGCGCTTGCCGCGCCACGCCTCAATGATGACGCCGGTGATGCCAAGCAATTCCGTCAC 126892 | | |||| ||||| || || || || || || | |||| | || |||||||| Sbjct 358 CCCCTTTTGCTCCGCCAAGCTTCTATTATCACCCCAGGCATGCACAACAGCTCCGTCAC 416 >seq55701 Length=1651 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||||||||| | || || ||||||||||| | || || || || | Sbjct 524 ATGCAAATCTTCGTAAAAACCTTAACCGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 465 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | ||| || | ||||||||||| ||||| | || || Sbjct 464 GATACAATCGAGAACG-TAAAGGCAAAGATTCAGGACAAAGAGGGCATTCCTCCAGATCA 406 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| | || |||| ||| || || || || || || | ||| || | ||||| || Sbjct 405 ACAAAGACTAATTTTCGCCGGAAAGCAACTAGAAGATGGGCGTACATTGTCAGACTATAA 346 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || || |||||| | || |||| || |||||||| Sbjct 345 TATTCAGAAGGAATCAACTTTGCACTTAGTGCTGCG 310 >seq166 Length=1413 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 126654 GGGCAACCGGAATAGTTGGCCGGGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGCC 126713 ||||| |||| | ||| || |||||||| || ||||| ||| ||| || || ||| | Sbjct 749 GGGCACGCGGAGTGGTTAGCGGGGTGGGGTCCCCCGCAATTGGCGCAGGTTGCTGGCTCT 808 Query 126714 TCACGGGGGCGGCTACAGTGCATGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGC 126773 || ||| || |||| |||| ||| || | ||||| | ||| || |||||| Sbjct 809 TCCTTGGGTCGTGGGCAGTCGCGGGCGAGGTGCTCCTCCCCGCACCTCACGCACGCGAGC 868 Query 126774 GGTCGGTGACAGTGATGGCTGCTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGG 126833 | | ||||||| |||||| |||||| || |||||||||||||| ||||| ||| Sbjct 869 CGCCTGTGACAGCCGTGGCTGGAGTGACGGAAGCCCTGGCAGCGATGACACTGCGCAGGG 928 Query 126834 CGGCGCTTG 126842 | | |||| Sbjct 929 CCCCCCTTG 937 >seq128806 Length=456 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 126661 CGGAATAGTTGGCCGGGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGCCTCACGGG 126720 |||| |||||||||||||| | || || |||||| ||||||||| ||| | || ||| Sbjct 185 CGGAGTAGTTGGCCGGGTGCGCTCCGCCACAGTTGGCGCACGTAGCGGGCTCTTCCAGGG 244 Query 126721 GGCGGCTACAGTGCATGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAGCGGTCGGT 126780 |||| |||| || || || ||||||||| ||| ||||| | || Sbjct 245 GGCGTGGGCAGTCGCGCGCAAGATGCTCTTCTCCGCATCTCACGCAGGCCA------GGC 298 Query 126781 GACAGTGATGGCTGCTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGGGGCGGCGCT 126840 ||| |||||| ||| | ||| |||||||||||||| ||||| |||| | | Sbjct 299 GAC--CCATGGCTTGAGTGCCTAAACGCCTGGCAGCGATGACACTGCGCCGGGCCCCTTT 356 Query 126841 TGCCGCGCCACGCCTCAATGATGACGCCGGTGATGCCAAGCAATTCCGTCAC 126892 ||| ||||| || || || ||||| || | |||| | || |||||||| Sbjct 357 TGCTCCGCCAAGCTTCTATTATGACCCCAGGCATGCACAACAGCTCCGTCAC 408 >seq54614 Length=296 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 38320 TTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACG 38379 |||||| || |||| ||||||||||| ||||| | |||||||| || || |||| | Sbjct 256 TTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCTCCAGACCAACAACGTCTAATTTTTG 197 Query 38380 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGA 38439 | || || |||||||| || | || || ||| ||||||||| || || || || | | Sbjct 196 CTGGTAAGCAGCTGGAGGATGGTCGTACGCTCGCCGACTACAATATTCAGAAAGAGTCTA 137 Query 38440 CGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | |||| ||||| ||||| | |||| || Sbjct 136 CTTTGCACTTGGTATTGCGTCTCCGAGGAGG 106 >seq64186 Length=616 Score = 82.4 bits (90), Expect = 8e-11 Identities = 168/247 (68%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 126653 GGGGCAACCGGAATAGTTGGCCGGGTGGGGCCCTCCGCAGTTGCAGCACGTAGCCGGCGC 126712 ||| || |||| ||||| || ||||| | || ||||||||| || || || ||| | Sbjct 131 GGGACATGCGGAGTAGTTAGCTGGGTGTGCTCCGCCGCAGTTGATACAGGTGGCGGGCAC 190 Query 126713 CTCACGGGGGCGGCTACAGTGCATGGCGGCGTGTTCACCTCCGCATCGCACACAGGCGAG 126772 | ||||||| |||| ||| ||||| | || || | ||| ||||| || Sbjct 191 ATTCAGGGGGCGCGGGCAGTCGCGCGCGAGTTGTTCTTCGCCACACCTCACGCAGGCCAG 250 Query 126773 -CGGTCGGTGACAGTGATGGCTGCTGTGACGAAATTGTTGGCAGCGATGACATTGCGCGG 126831 |||| | || || |||||| ||| | |||| |||||||||||| || || || | Sbjct 251 GCGGT-GATGGCACCCGTGGCTGGAGTGCCTAAATGCTTGGCAGCGATGGCACTGTGCTG 309 Query 126832 GGCGGCGCTTGCCGCGCCACGCCTCAATGATGACGCCGGTGATGCCAAGCAATTCCGTCA 126891 | | | ||| | |||||| ||||| || |||| |||| |||| | || ||||||| Sbjct 310 GTCCCCTCTTACTGCGCCAGGCCTCTATAATGATACCGGGCATGCATAACAGCTCCGTCA 369 Query 126892 CTTGGTA 126898 | | ||| Sbjct 370 CGTTGTA 376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497948650349440