Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq7548 116 5e-21 >seq7548 Length=2633 Score = 116 bits (128), Expect = 5e-21 Identities = 901/1440 (63%), Gaps = 63/1440 (4%) Strand=Plus/Plus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| || || ||||| | ||| | ||| | || || || || || ||||| |||||| Sbjct 483 GAAAGACCTCAACACATGCTAATGAGAGTCTCCATAGGCATTCACGGTGAAGACATTGAT 542 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAAC 111724 || | | || || | | |||||| | ||| || | || |||| || || Sbjct 543 AGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTT-ACACATGCAAGCCCTAC 601 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 || ||| || | |||||| | || || | ||| || |||||||| || | || Sbjct 602 ACTGTTCTCAGCAGCTACACCGCGGCCACAGCTTTCCTCCTGCTTCCTTATAGCTATGAA 661 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 || ||| || | ||||||| | ||| | | ||||||| ||| || || | Sbjct 662 AGACGATAGCATTGAAGGCATTTTTGATACTTTAAAACAATGTGCTTTAATTTCTAAATC 721 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA- 111902 |||||||| || || | || | ||| |||||||| || | || ||| ||| Sbjct 722 TGCTGGTGGCATAGGTTTACATACACATTGCATCAGAGCC--CAGGGTTCTTATATAGCT 779 Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 || || ||||| ||| ||||| | | |||||| | | || | |||| || || Sbjct 780 GGCACTAATGGGGTCTCAAATGGTCTAGTGCCAATGTTGAGAGTGTATAACAATACTGCC 839 Query 111963 CGCTATGTAAACCAAGCTGGG------CGTCGCAAGGGATCTATCGCAGTCTATCTTGAG 112016 | |||||| | |||| ||| |||| | | || | ||| | || | ||| Sbjct 840 AGATATGTAGATCAAGGTGGAAACAAACGTCCCGGTGCATTT---GCAATTTACTTAGAG 896 Query 112017 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG 112076 || ||||| || || || | |||||| | || || | ||| |||| | || || Sbjct 897 CCTTGGCATGCAGACATATTTGAGTTCTTAGATTTAAGGAAGAACACAGGTAAGGAAGAA 956 Query 112077 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTT 112136 | | | || || || | ||| | ||||| |||||||| || ||||| ||||| Sbjct 957 ATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATGAAAAGAGTA 1016 Query 112137 GAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGC 112195 || || || |||| ||| | ||||| | | || |||||| | || ||| Sbjct 1017 GAAAAGGATGAAGTTTGGAGTCTAATGTGTCCTCATGACTGTCCTGGTCTCGCTGACTGC 1076 Query 112196 CGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC 112255 ||| ||||||||||||| || || | || || || |||||| || | | Sbjct 1077 TATGGA-GAGGAGTTTGAAGAACTATATGCCAAATATGAAAAAGAAAAACGATTTA-TAA 1134 Query 112256 GACG-GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 || || |||| || | ||||| | ||| | | | ||| |||||||||| Sbjct 1135 AACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTA 1194 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 ||||||| ||| | || || || || |||||| |||||||||||||||||| | || Sbjct 1195 CACCATACATGTTGTATAAGGATGCTTGTAACAGGAAGAGTAATCAAAAGAATCTTGGCA 1254 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 || || || ||| || || || || | || ||| || ||||||| || Sbjct 1255 CTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGG 1314 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACA-AAGACA 112493 | || || || || || || || || || || || ||| || ||| ||| | Sbjct 1315 CAGTATGCAATCTTGCTTCCATAGCACTTAACATGTTTGTTGA-------ACATAAGCAA 1367 Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 ||| ||| | ||||| | | ||| | || |||| |||||| |||| |||||| ||| Sbjct 1368 TTTAATTTTAAAAAATTAAAAGAAATCACAAAAATTGTCACTCAAAATTTAAACAAAGTC 1427 Query 112554 ATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGT 112610 |||||| || ||||| || || ||| || | || ||||||| ||||| Sbjct 1428 ATTGATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATGAAGCACCGG 1484 Query 112611 CCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 112670 || || ||| | ||||| || || | || ||| ||| | ||| | | | | Sbjct 1485 CCTATCGGTATTGGTGTTCAGGGAATGGCAGATACATT-----TGTGTTGATGAG-AATA 1538 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGT----------ATATTTGAGACAATGTA 112720 || ||| ||| || |||| |||| | | | |||||||| || || || Sbjct 1539 CCTTACGA--AAGTGA--GAAAGCAATACTCCTTAATCAACAAATATTTGAAACTATTTA 1594 Query 112721 TCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTT 112780 | | | || | || || |||| || || ||||| || ||| |||| || | Sbjct 1595 TTATGGTGCATTAGAAGCTAGTTGTGAATTAGCAGAAAAAGAAGGTGCATACAGTACTTA 1654 Query 112781 TGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG---AAGGTGAGAC 112837 ||| || ||||| ||||| | || |||| ||||||||||| || | || Sbjct 1655 TGAAGGGAGTCCAGTGAGCCAAGGTATCCTACAATATGATATGTGGGACAAAACTCCTAC 1714 Query 112838 CAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGT 112895 | || | ||||||| || ||||| ||| || ||| | | ||| | || Sbjct 1715 GGAACT---GTGGGACTGGGCTGCCCTCAAAGAAAAAATAGCAA--AACATGGTTTGCGC 1769 Query 112896 AACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 112955 || ||| ||| | || || |||||||| ||||| || |||||||| | ||||| | | Sbjct 1770 AATTCTCTATTGTTAGCTCCTATGCCAACCGCCTCTACAGCACAAATTCTTGGTAACACT 1829 Query 112956 GAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 113015 || | |||||||||| || | ||||| || | |||||| | | | ||||| ||| Sbjct 1830 GAGTCTTTTGAACCCTTTACATCAAACATTTACCAAAGAAGAGTCTTATCTGGAGAATTT 1889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617982105973520