Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq7548 156 5e-33 >seq7548 Length=2633 Score = 156 bits (172), Expect = 5e-33 Identities = 903/1426 (63%), Gaps = 35/1426 (2%) Strand=Plus/Minus Query 105907 AAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTC 105966 ||| ||||| | | | |||||| | || ||||| | || |||||||||| | || Sbjct 1889 AAATTCTCCAGATAAGACTCTTCTTTGGTAAATGTTTGATGTAAAGGGTTCAAAAGACTC 1830 Query 105967 ATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 | | ||||| | |||||||| || ||||| |||||||| || || | ||| ||| || Sbjct 1829 AGTGTTACCAAGAATTTGTGCTGTAGAGGCGGTTGGCATAGGAGCTAACAATAGAGAATT 1770 Query 106027 ACGAAGACCCTTTTCCTTG--ATGCGTTCCTTGAGAACATCCCAGTCGTA--GTTGAGCT 106082 || | ||| | || ||| || ||| ||||| || ||||||| | ||| | Sbjct 1769 GCGCAAACCATGTT--TTGCTATTTTTTCTTTGAGGGCAGCCCAGTCCCACAGTTCCGTA 1712 Query 106083 TG-GTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCA 106141 | |||| |||||||||||| |||| || | |||||| | ||| || ||| Sbjct 1711 GGAGTTTTG---TCCCACATATCATATTGTAGGATACCTTGGCTCACTGGACTCCCTTCA 1655 Query 106142 AATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGA 106201 | || || | ||||| ||| || |||||||| || || || | | | | | Sbjct 1654 TAAGTACTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAA 1595 Query 106202 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 106261 || || |||||||| || | ||| | | |||| || || | | ||| Sbjct 1594 TAAATAGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAG-GTAT 1536 Query 106262 CGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCG 106320 || ||| | |||| ||| || | || |||||||| | ||| ||||| | ||| Sbjct 1535 TCTCATCAACACAAATGTATCTGCCATTCCCTGAACACCAATACCGATAGGCCGGTGCTT 1476 Query 106321 CATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377 |||||| || || || ||| || |||||||| || ||||||||| ||| Sbjct 1475 CATATTTGAAGTTTTTGCT---TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTT 1419 Query 106378 TAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGT 106437 || ||||| || ||||| ||||||||||| | | ||||| | ||| ||| ||| | Sbjct 1418 TAAATTTTGAGTGACAATTTTTGTGATTTCTTTTAATTTTTTAAAAT-TAAATTGC--TT 1362 Query 106438 CTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATC 106497 | |||| ||| || | ||| || || || || | |||||| || ||| ||||| Sbjct 1361 ATGTTCA---ACAAACATGTTAAGTGCTATGGAAGCAAGATTGCATACTGCCACTTCATC 1305 Query 106498 CTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATT 106557 | ||||| | | || || || || | ||| || ||||| || || | ||| Sbjct 1304 TTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATT 1245 Query 106558 CTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTC 106617 |||||| |||||||| |||| || |||||||| || | |||||| || || || ||||| Sbjct 1244 CTTTTGATTACTCTTCCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTC 1185 Query 106618 CGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTACAATGGCGT-TGGCCC 106676 | || | | | ||||| |||||| | || ||| || || | | | Sbjct 1184 CACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGAC-TTGTTTTATAAATC 1126 Query 106677 GTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAG 106735 || || || || || | || || ||||||||||||| ||| || ||| | | Sbjct 1125 GTTTTTCTTTTTCATATTTGGCATATAGTTCTTCAAACTCCTC-TCCATAGCAGTCAGCG 1067 Query 106736 AGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTC 106795 ||||| || | | ||||| | ||| ||| || ||| || || | ||| Sbjct 1066 AGACCAGGACAGTCATGAGGACACATTAGACTCCAAACTTCATCCTTTTCTACTCTTTTC 1007 Query 106796 ATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCA 106855 || || || ||||| ||||| | | |||| || |||||| | ||||| | | Sbjct 1006 ATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 947 Query 106856 CCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAG 106915 ||| ||| | ||| || | |||||| | || || || ||||| ||||| | || Sbjct 946 CCTGTGTTCTTCCTTAAATCTAAGAACTCAAATATGTCTGCATGCCAAGGCTCTAAGTAA 887 Query 106916 ACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTT 106971 | ||| | | || | || | ||| |||||| |||||| | || || ||| Sbjct 886 ATTGCAAATGCACCGGGACGTTTG-TTTCCACCTTGATCTACATATCTGGCAGTATTGTT 828 Query 106972 AAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGA 107031 | | || | | |||||| | | ||||| ||| ||||| || || ||| ||| Sbjct 827 ATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATATAAGA 768 Query 107032 TTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTG 107091 | |||||| | ||| | || | || || || ||||| | || || ||| Sbjct 767 ACCCTGGGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAA 708 Query 107092 CGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAG 107151 ||||| | | | ||| || | || || | || || || || | || ||||| Sbjct 707 AGCACATTGTTTTAAAGTATCAAAAATGCCTTCAATGCTATCGTCTTTCATAGCTATAAG 648 Query 107152 GAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTG 107211 |||||| ||| | ||| || | |||||| | || ||| || || || |||| || Sbjct 647 GAAGCAGGAGGAAAGCTGTGGCCGCGGTGTAGCTGCTGAGAACAGTGTAGGGCTTGCATG 588 Query 107212 AATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCC 107270 | || ||| | | |||||| | | || || | | || |||||||||||| | Sbjct 587 TGT-AAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCAC 529 Query 107271 CGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTC 107316 |||| ||||| |||| || | ||| | ||||| ||| ||| |||| Sbjct 528 CGTGAATGCCTATGGAGACTCTCATTAGCATGTGTTGAGGTCTTTC 483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587357295502840