Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq282688 87.8 2e-12 >seq282688 Length=1103 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 153900 AGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATC 153959 ||||||||||| ||||| ||||| ||||| || | ||||| ||||| ||| || || Sbjct 456 AGATTAGCACTTCAGACAAGAGAACAGCACATACGTAGAGATAAAGCCACCTCAAATATT 397 Query 153960 TGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGG 154015 || || ||||||||||| |||| |||||||| | | || |||||||| || || Sbjct 396 TGTACGGCTCAGGCACTTTTGGCAAATATGTCCGCTATGTACGCAGCATACCACGG 341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576637178241440