Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq161992 235 4e-56 seq109232 192 5e-43 seq33847 183 2e-40 seq55701 159 3e-33 seq31672 147 2e-29 seq173781 134 1e-25 seq54613 127 2e-23 seq4695 125 6e-23 seq31671 120 2e-21 seq2515 109 4e-18 seq35958 98.7 8e-15 >seq161992 Length=3130 Score = 235 bits (260), Expect = 4e-56 Identities = 537/800 (67%), Gaps = 10/800 (1%) Strand=Plus/Plus Query 551789 TGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGA 551848 ||||||| |||||||||| || ||||| || || || | || || | | | ||| Sbjct 1415 TGGAGATACTCATCTTGGAGGAGAAGACTTCGACAACCGCCTAGTCAACTTTTTAGCTGA 1474 Query 551849 AGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCT 551908 || |||||| ||||| || | || || | | | | | ||||| || |||||||| Sbjct 1475 CGAGTTTAAAAGAAAACACCAGAAAGACCTTTATTCTAATCCAAAAGCGCTACGTCGTCT 1534 Query 551909 AAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGA 551968 ||||| | || |||| || || | ||||| ||| ||||| || | | ||||| Sbjct 1535 TAGAACAGGAGCAGAGCGAGCAAAGCGTACACTTTCTTCTAGTACTGAAGCTAACATTGA 1594 Query 551969 AGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGA 552028 | | || | |||| ||||| || |||| || || |||| || || | |||||| Sbjct 1595 AATTGACGCTTTATACGAGGGCATAGATTTCTATTCGAGAGTTTCTAGAGCAAGATTTGA 1654 Query 552029 AGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGA 552088 ||| | | ||||| | ||| ||||||| | || | ||| ||| | | | ||| ||| Sbjct 1655 AGAGCTGAATGCTGATTTATTTCGAAAAACTTTAGATCTAGTGGAAAAGGCTCTAAAAGA 1714 Query 552089 TTCAAAGATTGATAA--ATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 | | || | || || || ||| | |||| || ||| | ||||| || || ||| | Sbjct 1715 TGCTAAATTAGACAAGAATTCAA--TCAATGACATCGTGTTAGTTGGAGGTTCGACACGG 1772 Query 552147 ATTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAG 552205 ||||||||||| || | ||| | ||| ||||||||| |||||| | ||| Sbjct 1773 ATTCCTAAAATCCGGTCGCTTTTACAAAACTT-TTTCAATGGAAAAAAACTTAATTTGTC 1831 Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG- 552264 | | |||||||| || |||||||| ||||| || ||| ||||||||||||| || || Sbjct 1832 TATAAATCCAGACGAAGCTGTTGCATATGGAGCTGCAGTTCAAGCAGCTATACTAAGTGG 1891 Query 552265 -GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTT 552323 ||||||| | | | || | ||| || | || ||||||| ||||| || || || Sbjct 1892 CGACAAAC-GTTCTAGAA-TCCAAGGCGTTCTGCTATTAGATGTAACTCCCCTGTCACTA 1949 Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 ||| |||| || | |||||| |||||| || | | ||| |||| ||| || ||| Sbjct 1950 GGTATAGAGACGGCTGGAGGAGCTATGACAAAAATAGTAGATCGAAACGCTAAAATACCT 2009 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 | | | | |||| ||| | || || | || ||||| || | || || || ||| Sbjct 2010 TCCAGACATTCTCAAACATTCACAACATACACTGACAATCAGCCTTCAGTCACTATACAA 2069 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 | | |||||| ||||| | | |||||||| || ||| | | || || ||| ||| Sbjct 2070 GTGTATGAAGGTGAAAGTGCAATGACTAAAGACAACAATTTATTGGGCACATTTGCTTTG 2129 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 ||||| || | ||||| || || || || |||||||| |||| || ||| | ||| Sbjct 2130 ACGGGTATACCGCTAGCTCCACGCGGTGTCCCTCAAATTGACGTTATATTTGATTTAGAT 2189 Query 552564 GCCAATGGAATTTTGAATGT 552583 || ||||| || | ||||| Sbjct 2190 GCGAATGGGATACTAAATGT 2209 Score = 192 bits (212), Expect = 5e-43 Identities = 398/586 (68%), Gaps = 6/586 (1%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || |||||||| || |||||| |||||| ||||| ||||| |||||| Sbjct 759 GCTATCGGGATTGATTTAGGTACAACATATTCTTGTGTCGGTGTGTGGCAGCGTGGTAAT 818 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || | ||| | ||||| |||||||| || || || || ||| | ||||| Sbjct 819 GTGGACATCATAGTGAATAAACAAGGGAACAGAACCACACCGTCATACGTTGCCTTCACT 878 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||| | || |||| ||||| || || | |||| | || || ||| Sbjct 879 GATACTGAGCGCCTAATTGGGGATGCGGCGAAGAACCAAGTAGCCTTAAACCCAGTGAAT 938 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || || ||||| || |||||| |||| || || | | ||||| | || | || | Sbjct 939 ACAATATTTGACGCAAAACGTCTAATAGGCAGGAAATACGATGATCCTACAATCCAACAA 998 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 || | || |||||||| ||| | | || |||| ||| ||||| | || ||| Sbjct 999 GACTTAAAACATTGGCCCTTCAAGGTAGTCAATGAAGGTGGGAAACCAAAAATACAAGTC 1058 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTT-CATCTATGGTTTTAAT 550350 ||| || |||| ||||| ||| |||| ||| |||| || | |||||| | || Sbjct 1059 ACTTATAGAGGAAAGACTAAACGTTTTGCACCCGAAGAAATAAGCAGC-ATGGTTCTTAT 1117 Query 550351 GAAAATGAAACAAACAGCCAGTGCTTTTGTTGG-TCAAGAAGTTACG-GATGCAGTAATA 550408 ||||||||| | || || | | | | || ||| | || | || || || || Sbjct 1118 TAAAATGAAAAAGACGGCGGAATCGTATATGGGGTCATTCA--TATGTGACGCGGTTATT 1175 Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || ||||| || || ||||| ||||| || |||||||||| |||| Sbjct 1176 ACAGTTCCTGCCTACTTTAACGATTCTCAACGACAAGCAACAAAAGATGCTGCCACTATT 1235 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || | ||| ||||| | |||||| || || ||||||||||| || ||| | || || || Sbjct 1236 GCCGAACTAAATGTACGTCGTATCATAAACGAACCTACTGCAGCAGCATTGGCCTACGGC 1295 Query 550529 CTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATT 550574 | |||||| || | | |||| ||||| | || ||||||| Sbjct 1296 TTAGATAAAAATTTTAAAGGAGAATCAAATGTTTTGATTTTTGATT 1341 >seq109232 Length=3590 Score = 192 bits (212), Expect = 5e-43 Identities = 372/547 (68%), Gaps = 4/547 (1%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || || || ||||| || |||||||| |||||||| || |||||| |||| || Sbjct 2692 GCGATTGGAATTGATTTGGGTACCACATACTCGTGTGTTGGAGTATGGCAACATGGAAAC 2633 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| ||||| || || || || ||| | |||||||| || ||||| | ||||| Sbjct 2632 GTGGAAATCATTGCTAACGACCAGGGCAACCGTACTACTCCTTCATATGTCGCATTCACC 2573 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | | ||||||||||| || | || | | || ||||||| ||| Sbjct 2572 GACACAGAGCGACTCATCGGTGATGCAGCCAAGAACCAGGTCGCTCTCAATCCTAACAAC 2513 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || | |||||||| || || || || || | | || | || | | | || Sbjct 2512 ACAGTGTTTGATGCAAAGCGATTGATCGGCCGCAAGTTCGACGACCCCAAGATACAACAG 2453 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 || ||| | || ||||| ||| || | || | | |||||| ||| | | ||| | Sbjct 2452 GACATGCAACACTGGCCGTTCACGGTTATCAACGAATGTGGAAAGCCTAAGGTCCAAGTT 2393 Query 550292 ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATC--TATGGTTTTAA 550349 | ||||| | ||| |||| | || ||| |||| || | ||||||| | | Sbjct 2392 GATTTCAAAGGACAGGCGAAAAAATTCGCTCCCGAAGAAAT--CAGCAGTATGGTTCTTA 2335 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 || ||||| ||| ||| |||| | | || |||| ||||| || || | Sbjct 2334 CAAAGATGAAGGAAATAGCAGAGGCTTATCTGGGAACGCAAGTGCGTGATGCGGTCATCA 2275 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 ||||||| || || || || ||||| ||||| || || ||||||||||| ||| ||| | Sbjct 2274 CTGTACCCGCTTACTTCAACGACTCTCAACGCCAGGCAACTAAAGATGCGGGAGCTATCG 2215 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || || || || ||||| ||||||||||||||||| ||||| ||||| || || || | Sbjct 2214 CAGGCCTCAACGTCCTTCGAATTATCAATGAACCTACAGCTGCCGCACTGGCCTACGGTC 2155 Query 550530 TTGATAA 550536 |||| || Sbjct 2154 TTGACAA 2148 >seq33847 Length=3399 Score = 183 bits (202), Expect = 2e-40 Identities = 257/355 (72%), Gaps = 12/355 (3%) Strand=Plus/Plus Query 368790 AGGAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCC 368849 || ||| || |||||||||||||| ||||| ||||||||||||| ||||| |||||||| Sbjct 1104 AGAAGTATTTGATTGCTGGTTTGAGTCAGGATCTATGCCTTATGCTCAAAATCATTATCC 1163 Query 368850 ATTTGATAACGCAAAATACTTTGATAATGATAAAGATTATGTGGCTGATTTTGTAACAGA 368909 ||||| || |||| | |||||| | || ||| | | | |||||| | || Sbjct 1164 TTTTGAAAATAAAAAAGAATTTGATGA-----AATATTCCCAG-CAAACTTTGTAGCTGA 1217 Query 368910 ATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTT 368969 | |||||||| || | ||||||||||| || || | || ||||| ||||| | || Sbjct 1218 AGGTATTGATCAGACTAGAGGTTGGTTTTACACATTAATTGTTTTATCTACAGCATTATT 1277 Query 368970 CGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTG-TTAATGCATCTGATGGTC 369028 ||||||| | ||||||||| |||| | || ||| |||| || ||||| ||||| | Sbjct 1278 TAATAAACCTCCATTTAAAAATCTAATCGCAAATGG-ATTGATTCTGGCATCAGATGGGC 1336 Query 369029 AAAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATTTG 369088 | || ||||| ||||| ||| |||||| | |||||| | | ||| |||| || Sbjct 1337 AGAAAATGTCCAAAAGAAAGAAAAATTATCCAGATCCTTTGGATGTTGTTGCGAAATATG 1396 Query 369089 GTGCTGATACTTTGAGATTATACCTATTGTCA--TCACCTGTAGTAAAAGCAGAA 369141 | |||||| |||| ||| | |||| |||| | ||||| || || ||||||||| Sbjct 1397 GCGCTGATGCTTTAAGACTGTACC--TTGTAAACTCACCAGTGGTTAAAGCAGAA 1449 >seq55701 Length=1651 Score = 159 bits (176), Expect = 3e-33 Identities = 170/222 (77%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || ||||| ||||| || || | ||| |||||| ||||||||| |||| |||||| Sbjct 76 CTCAGACGTAGTACCAGGTGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGATAGAGTG 135 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||||||||| || ||||| ||||||||||||||||||||||| || ||||| || Sbjct 136 CGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCC 195 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 |||||||| |||||||| || || ||||||||||||| | | || ||| | Sbjct 196 TCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAG-AAGCTTCCACTTCCAA 254 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| ||| || || ||||| || || || ||||||||||| Sbjct 255 AGTAATAGTCTTGCCTGTAAGTGTCTTTACAAAAATTTGCAT 296 >seq31672 Length=1523 Score = 147 bits (162), Expect = 2e-29 Identities = 289/422 (68%), Gaps = 18/422 (4%) Strand=Plus/Minus Query 550160 AATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCG 550219 ||||| | || || |||||||||| |||||||||||||| | | ||| | ||| | Sbjct 1499 AATCCAAATAACACAGTTTTTGATGCAAAACGTTTAATTGGCCGTAAATTTGAAGATCCC 1440 Query 550220 ACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCT 550279 | ||||| |||||| || |||||||| || ||| | | || || || || Sbjct 1439 AAAATTCAGCAAGATATAAAACATTGGCCCTTTCAAGTAATCTCTGACGAGGGGAAGCCA 1380 Query 550280 TATATTGAAG----CTACTCATGAAGGATCTGTTAAACAATTTTCA--CCAGAACAAATT 550333 | || | || |||| | || | ||| || | |||| |||||| ||||| Sbjct 1379 AAGATAGTAGTAAACTACAAAGGA-GAATCACGTAGA-----TTCAGCCCAGAAGAAATT 1326 Query 550334 TCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTT 550393 || || |||||||| | |||||||||| ||| || | | | ||| | | || Sbjct 1325 TCGTCAATGGTTTTGACGAAAATGAAAGAAATCGCTGAAACGTACCTCGGTGGAAAGGTA 1266 Query 550394 ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAA 550453 | || ||||| ||||| ||||||||||||||||||||| ||||||| || || || || Sbjct 1265 AAAGACGCAGTCATAACCGTACCAGCATATTTTAATGACGCACAACGGCAGGCAACGAAG 1206 Query 550454 GATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCT 550513 || || || |||||| | ||| ||||| | | ||||| |||||||| || || || Sbjct 1205 GACGCCGGTGTTATTGCCGCACTGAATGTCTTAAGAATTATTAATGAACCAACAGCAGCA 1146 Query 550514 GCACTTGCATATGGACTTGATAAACATAATGATCAA---GAACTTAATGTACTCATCTTT 550570 || || |||||||| | |||| | | | ||| || ||| ||||||||||| ||| Sbjct 1145 GCTCTCGCATATGGTTTAGATAGAGA-ATTGA--AAGGTGAAAAAAATGTACTCATTTTT 1089 Query 550571 GA 550572 || Sbjct 1088 GA 1087 >seq173781 Length=4458 Score = 134 bits (148), Expect = 1e-25 Identities = 394/597 (66%), Gaps = 14/597 (2%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||| | || ||||||||| ||||||||||| |||||| |||| || Sbjct 2019 GCTATTGGAATTGATCTTGGTACCACATATTCCTGTGTTGGTGTGTGGCAACATGGCAAT 1960 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || |||||||| |||||||| || |||||| |||| || || || || || |||| || Sbjct 1959 GTGGAAATTATCGCCAATGACCAGGGTAACCGAACAACACCTTCATACGTCGCTTTTACT 1900 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || ||||| | || |||| ||||| || ||| |||| || || || | ||| Sbjct 1899 GACACTGAGCGCTTGATTGGCGATGCGGCGAAAAGCCAAGTGGCTTTGAACCCCAACAAC 1840 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||| || || ||| | | || ||| | | || | || | | || Sbjct 1839 ACAGTTTTCGACGCGAAAAGGCTGATCGGACGCAAATTCGACGACCAAAAGATACAACAG 1780 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 |||||||| || ||||| || | | | |||| | || ||||| | || | | | Sbjct 1779 GATATGAAACACTGGCCATTTAAGGTAATCAATGATGGCGGTAAACCAAAAATCCAGGTT 1720 Query 550292 --ACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAAT-TTCATCTATGGTTTTA 550348 | ||| |||| | ||| |||| | || ||| | || || | |||||||| Sbjct 1719 GAATTCA--AAGGCGAAGCCAAAAGATTTGCTCCTGAAGAGATCAGCAGC-ATGGTTTTG 1663 Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACG-GATGCAGTAAT 550407 | || ||||| |||| || || | | |||| || |||| || || || || Sbjct 1662 ACAAAGATGAAGGAAACCGCAGAGGCATATCTTGG-CACATCTGTACGCGACGCCGTCAT 1604 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 || || || || || || || ||||| || || || || || || || |||||| || Sbjct 1603 CACAGTTCCCGCTTACTTCAACGACTCCCAGCGACAGGCAACGAAGGACGCTGGAGCCAT 1544 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||||| | || || || | || ||||||||||| || ||||| || | |||||||| Sbjct 1543 AGCTGGCTTAAACGTCCTAAGAATCATCAATGAACCCACCGCTGCAGCTTTGGCATATGG 1484 Query 550528 ACTTGATAAACATAATGATCAA---GAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 |||| || | ||| || ||| |||||||| ||||| ||| |||||| Sbjct 1483 -CTTGGACAAGAATTTGA--AAGGCGAAAGAAATGTACTAATCTTCGATCTTGGAGG 1430 >seq54613 Length=3623 Score = 127 bits (140), Expect = 2e-23 Identities = 165/223 (74%), Gaps = 10/223 (4%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTC 563314 ||||| ||||| |||||||||||| || ||||| || ||||| |||| || || | Sbjct 2660 AGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGG--ATGTTGTAGTCAGAAAGTGTAC 2603 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 |||||| | ||| ||||| |||||||| | | ||| ||||| |||||||| |||| Sbjct 2602 GGCCATCTTCTAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTT 2543 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC---AGTGTGAGTACATTCGA 563431 | || ||||||||||| |||||| ||||| ||||| || | | || ||| | Sbjct 2542 CCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCTTCA--AC-TTCCA 2486 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| |||||||| ||||| ||||| || ||||| ||||| Sbjct 2485 AAGTAATGGTTTTACCCGTAAGTGTTTTGACAAAAATCTGCAT 2443 Score = 125 bits (138), Expect = 6e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| ||||| ||||||||||| |||||| |||||| || |||| ||| || | Sbjct 3563 AGACGCAGTACCAGATGAAGGGTGGATTCTTTTTGAATATTATAGTCAGATAGTGTGCGA 3504 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | ||| || || ||||| ||||| | ||||||||||| || || || ||| Sbjct 3503 CCATCTTCTAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATACCCTCT 3444 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || ||||| ||||| |||||| ||||||||||||| | | ||| | ||| Sbjct 3443 TTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCAGAGGCTTCAACTTCTAAAGTG 3384 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| || ||||| || || || || || |||||| Sbjct 3383 ATTGTTTTCCCTGTAAGTGTCTTTACAAAGATCTGCATA 3345 Score = 105 bits (116), Expect = 5e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||||||||| |||| ||| || | |||||| | ||| || || ||||| Sbjct 3078 TTCTTTTTGAATATTGTAGTCAGATAGTGTGCGACCATCTTCTAATTGCTTACCAGCAAA 3019 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||||| | ||||||||||| || || || ||||| ||||| ||||| |||||| Sbjct 3018 GATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATT 2959 Query 563403 CTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAAC 563462 ||||||||||||| | | ||| | ||| | ||||| ||||| || || || || Sbjct 2958 TTCAATTGTATCAGAGGCTTCAACTTCTAAAGTGATTGTTTTCCCAGTGAGTGTCTTTAC 2899 Query 563463 GAAAATTTGCATA 563475 || || |||||| Sbjct 2898 AAAGATCTGCATA 2886 >seq4695 Length=6888 Score = 125 bits (138), Expect = 6e-23 Identities = 192/271 (71%), Gaps = 6/271 (2%) Strand=Plus/Plus Query 550316 TTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCT 550375 ||| | || ||| ||||||| ||||||| | | |||||||| |||| || ||| Sbjct 921 TTTGCTCCTGAAGAAATTTCCGCTATGGTCCTCACTAAAATGAAGGAAACTGCTGAAGCT 980 Query 550376 TTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCA 550435 | | |||| || | ||||| |||| || | ||||| ||||| ||||| || ||| | Sbjct 981 TATCTTGGCAAAAAGGTTACTCATGCTGTTGTTACTGTGCCAGCCTATTTCAACGACGCT 1040 Query 550436 CAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATC 550495 ||||||||||| || || || ||||| || ||||| |||||||| | | || ||| Sbjct 1041 CAACGTCAAGCCACCAAGGACGCTGGTGTCATCGCTGGTCTTAATGTGATGAGAATCATC 1100 Query 550496 AATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTT 550555 || || ||||||||||| || | || || || |||||||| | | | | |||| Sbjct 1101 AACGAGCCTACTGCTGCAGCTATCGCTTACGGTCTTGATAAGAAGGAAGGT-GAGAA--G 1157 Query 550556 AATGTACTCATCTTTGATT---GTGGAGGTA 550583 ||||||||| | || |||| |||| |||| Sbjct 1158 AATGTACTCGTTTTCGATTTGGGTGGTGGTA 1188 >seq31671 Length=1021 Score = 120 bits (132), Expect = 2e-21 Identities = 124/160 (78%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| |||| |||||| | || ||||| || ||||| || |||| || ||||| || Sbjct 497 AGCTGTAGGAATAGATCTTGGCACCACGTACTCCTGTGTGGGAGTTTTCCATAATGGAAA 556 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||| |||||||| || ||||| || |||||||| ||||| |||||| |||| | Sbjct 557 AGTTGAAATCATTGCCAACGACCAAGGAAATAGAACTACACCATCGTATGTTGCTTTTAA 616 Query 550111 GGAAACTGAAC-ATTTAGTTGGTGATGCAGCAAAATATCA 550149 || || |||| | ||| | || |||||||| ||| |||| Sbjct 617 TGATACCGAACGACTTA-TCGGAGATGCAGCCAAAAATCA 655 >seq2515 Length=4501 Score = 109 bits (120), Expect = 4e-18 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 || || || |||||||| | || ||| || ||| || ||||||| | || | | Sbjct 3684 AGTCGCAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTATAATCAGACAATGTACGT 3625 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || || || ||||| || | || |||||| || || ||||| ||||| Sbjct 3624 CCATCTTCTAGCTGCTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGAATACCTTCC 3565 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGT 563435 |||||||| || || |||||| ||||| ||||||| | | | || || || || Sbjct 3564 TTATCTTGGATCTTAGCTTTTACATTTTCAATAGTATCAGAG-GCTTCCACCTCAAGGGT 3506 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || |||||||| ||||| || || |||||||||||||| Sbjct 3505 AATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 3467 >seq35958 Length=3977 Score = 98.7 bits (108), Expect = 8e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| || || || ||||||||||| | ||||| ||| | || || || |||||||| Sbjct 2789 GCAGTCATTACAGTTCCAGCATATTTCAGCGACTCCCAAAGACAGGCCACAAAAGATGCG 2730 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || || |||| || || ||||| || |||||||| ||||| |||||||| || || Sbjct 2729 GGTACCATCTCTGGTCTGAACGTTCTCCGAATTATCAACGAACCCACTGCTGCGGCGATT 2670 Query 550520 GCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 ||||| || || || ||| | | | ||||| ||| || || || || ||| Sbjct 2669 GCATACGGTCTAGACAAAAAGGGAGCTGGAGAACGTAACGTGCTAATTTTCGAT 2616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4010482811528090