Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq52122 105 8e-18 seq198901 91.5 2e-13 >seq52122 Length=5755 Score = 105 bits (116), Expect = 8e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 37479 GAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGA 37538 || || | |||||| || || || |||||||||||||| ||||| ||||| | | |||| Sbjct 5755 GAATGGACATTTTCCATGGCAATTTGAAAACCATAAAAGCACCTGGCTTCGGTCACTTGA 5696 Query 37539 ACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAG 37598 || || | | |||| || | ||||| |||||||| || |||||| |||||| ||| Sbjct 5695 ACCTCTTGTGAGAACCGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCTGCGAAG 5636 Query 37599 AAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATC 37654 || || | |||| || ||||||||| | ||| || | |||| | | |||||| Sbjct 5635 AATGCTAAGACATGCTTGATAAAATGTTTCTCACAATCTTTTAATGTCTCCCAATC 5580 >seq198901 Length=1071 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 153288 GGTGTTTTACATACAAAATTTTGGATAGTTGATAATAAACATGTATATATAGGAAGTGCT 153347 || || ||||||||||| ||||||||||| ||| |||||| | ||||| || ||||| Sbjct 368 GGAGTGTTACATACAAAGTTTTGGATAGTCGATCGGAAACATTTCTATATCGGTAGTGCC 309 Query 153348 AATATGGATTGGAGATCACTAACTCAAGTA 153377 |||||||| ||||| ||||| ||||| ||| Sbjct 308 AATATGGACTGGAGGTCACTCACTCAGGTA 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589682907865640