Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq7548 199 5e-46 >seq7548 Length=2633 Score = 199 bits (220), Expect = 5e-46 Identities = 905/1414 (64%), Gaps = 47/1414 (3%) Strand=Plus/Plus Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 |||| || || ||||| | ||| | ||| | || ||||| ||||| |||||||||||| Sbjct 483 GAAAGACCTCAACACATGCTAATGAGAGTCTCCATAGGCATTCACGGTGAAGACATTGAT 542 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 75324 || | | || || | | |||||| | | ||| || | || |||| || || Sbjct 543 AGTGCAATCAATACTTATAATATGATGTCAGAGAAATATTTT-ACACATGCAAGCCCTAC 601 Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384 || ||| || | |||||| | || ||| | ||| ||||||||||| || | || Sbjct 602 ACTGTTCTCAGCAGCTACACCGCGGCCACAGCTTTCCTCCTGCTTCCTTATAGCTATGAA 661 Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444 || || || | || || | || ||| | | | ||||| ||| || || | Sbjct 662 AGACGATAGCATTGAAGGCATTTTTGATACTTTAAAACAATGTGCTTTAATTTCTAAATC 721 Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504 ||||| || || || | || | ||| | |||||| | ||| ||| || Sbjct 722 TGCTGGTGGCATAGGTTTACATACACATTGCATCAGAGCCCAGGGTTCTTATATAGCTGG 781 Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564 || ||||| ||| ||||| | | |||||| | | || | |||| || || | Sbjct 782 CACTAATGGGGTCTCAAATGGTCTAGTGCCAATGTTGAGAGTGTATAACAATACTGCCAG 841 Query 75565 CTATGTAAATCAAGCGGGG------CGTCGCAAGGGGTCCATC-GCGGTCTACTTGGAAC 75617 |||||| |||||| || |||| | ||| ||| || | ||||| || | Sbjct 842 ATATGTAGATCAAGGTGGAAACAAACGTCCC----GGTGCATTTGCAATTTACTTAGAGC 897 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677 | |||||||| || || | |||||| | || ||| | ||| |||| | ||||| Sbjct 898 CTTGGCATGCAGACATATTTGAGTTCTTAGATTTAAGGAAGAACACAGGTAAGGAAGAAA 957 Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 | |||||| || |||| | | ||||| ||||| || || ||||| | || | Sbjct 958 TGAGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATGAAAAGAGTAG 1017 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCG 75796 | ||| || ||| ||| | ||||| | | || |||||| | ||| || Sbjct 1018 AAAAGGATGAAGTTTGGAGTCTAATGTGTCCTCATGACTGTCCTGGTCTCGCTGACTGCT 1077 Query 75797 GTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCA---AT 75853 ||| ||||||||||||| || || | || |||||| | || | | | | || Sbjct 1078 ATGGA-GAGGAGTTTGAAGAACTATATGCCAAATATGAAAAAGA----AAAACGATTTAT 1132 Query 75854 GCGACT-GTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGG 75912 || || ||| || | |||||| | ||| | || | || ||||||||| Sbjct 1133 AAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAGAAGCCCAAGTGGAGACTGG 1192 Query 75913 AACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGG 75972 |||||||| ||| | || |||||||||||||||| ||||||||| ||||||||| | || Sbjct 1193 TACACCATACATGTTGTATAAGGATGCTTGTAACAGGAAGAGTAATCAAAAGAATCTTGG 1252 Query 75973 AACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGAC 76032 || || || | ||||||||||| || || | | ||||| | ||||| Sbjct 1253 CACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAAGATGAAGT 1312 Query 76033 GGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCAC 76092 ||| || |||||| | || || || || ||| | || ||| |||| | | ||| Sbjct 1313 GGCAGTATGCAATCTTGCTTCCATAGCACTTAACATGTTTGT---TGAACATA--AGCA- 1366 Query 76093 TTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGT 76152 ||| ||| | ||||| | | ||||||||||| ||||| || ||||| ||||| ||| Sbjct 1367 ATTTAATTTTAAAAAATTAAAAGAAATCACAAAAATTGTCACTCAAAATTTAAACAAAGT 1426 Query 76153 CATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 |||||| || |||||||| || ||| || || || |||||| ||| | Sbjct 1427 CATTGATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATGAAGCACCG 1483 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCAT 76268 ||||| ||| | |||||||| || | || ||| |||| | ||| || ||| | | Sbjct 1484 GCCTATCGGTATTGGTGTTCAGGGAATGGCAGATACATTTGTGTTGATGAGAATAC-CTT 1542 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 || || |||| | | ||| | || |||||||| || ||| | | Sbjct 1543 ACGAAAGTGAGAAAGCAATACTCCTTAATCAACAAATATTTGAAACTATTTATTATGGTG 1602 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 | | || || ||||||||||| || ||| ||||| | || || | ||| || Sbjct 1603 CATTAGAAGCTAGTTGTGAATTAGCAGAAAAAGAAGGTGCATACAGTACTTATGAAGGGA 1662 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAAC-CAAGCTCAAC 76447 ||| | | |||||| | || || | |||||||||||| |||| | | ||| Sbjct 1663 GTCCAGTGAGCCAAGGTATCCTACAATATGATATGTGGGA---CAAAACTCCTACGGAAC 1719 Query 76448 --TACGACTGGGATGTTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCT 76503 | ||||||| || ||||| ||| || ||| | | ||| | || || ||| Sbjct 1720 TGTGGGACTGGGCTGCCCTCAAAGAAAAAATAGCAA--AACATGGTTTGCGCAATTCTCT 1777 Query 76504 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563 ||| | || || |||||||| ||||| || |||||||| | ||||| | ||| | || Sbjct 1778 ATTGTTAGCTCCTATGCCAACCGCCTCTACAGCACAAATTCTTGGTAACACTGAGTCTTT 1837 Query 76564 TGAACCATACACAACAAACATCTACCTGAGAAGA 76597 |||||| | ||| ||||||| |||| |||||| Sbjct 1838 TGAACCCTTTACATCAAACATTTACCAAAGAAGA 1871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593916796674080