Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq30462 197 1e-45 seq121238 192 5e-44 seq75004 179 3e-40 seq53481 113 4e-20 seq55701 107 2e-18 seq54613 91.5 1e-13 seq2515 91.5 1e-13 seq37844 86.0 5e-12 seq54614 84.2 2e-11 >seq30462 Length=2600 Score = 197 bits (218), Expect = 1e-45 Identities = 136/154 (88%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 34490 TGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 ||||||| | || ||||||||||||| || |||||||||||||| || |||||||||| Sbjct 2071 TGGCCGGCCTCCCGAGCGCCTTGGCGACCTCCGGCATGTTGACGATAACCGTCTTGATGC 2012 Query 34550 CGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGT 34609 |||| ||||| || |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2011 CGTTCCCCTTGCCCTCGACCTTGGCGCAGATGCGCGGCATCTTGTAGCGGTAGAACGCGT 1952 Query 34610 CCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 ||||||| || ||||| |||||||| | |||||| Sbjct 1951 CCGCCACGTTCCGGTTCACGTTCACGGACCCCAT 1918 >seq121238 Length=2101 Score = 192 bits (212), Expect = 5e-44 Identities = 585/892 (66%), Gaps = 19/892 (2%) Strand=Plus/Minus Query 28881 CATCTGTTATACGGCTTCGTACCTATTTGCGGCGGCGACGGGCTCAACGACGCCCTTAAA 28940 ||||| | ||||||||| | || ||||||||||| ||||| |||| ||| | | ||| Sbjct 1285 CATCTACTCTACGGCTTCATTCCAATTTGCGGCGGTGACGGTATCAATGACAGCTTAAAA 1226 Query 28941 ACCATACCCGGTAGTTTTGAAGCGCTGCAACGTTCGTGCAACGGCCGTTCAGATTTTAAA 29000 || || ||||| |||| | || || || || | |||||| ||||| ||| Sbjct 1225 GAGATCGAAGGCAGTTTCCAAGCATTACAGCGATCTTGTAGCGGCCGCGAGGATTTCAAA 1166 Query 29001 GTTGCTATTCACGATCCTTGGGCCGCAATACAAAAACCGCAAAAGGGCGTGTCTGCGTGG 29060 || | || || ||||| ||||| ||| |||||||||| |||| || ||||| | ||| Sbjct 1165 GTCTCAATCCATGATCCATGGGCAGCATTACAAAAACCACAAAGAGGATTGTCTTCATGG 1106 Query 29061 AACGAGCCCTACAAAGGCAATTTCGGTCAGCTCATGGCTGCCAAGTTGGCCAATCCACAC 29120 || || ||||||||||||||||| || || | ||| || ||| ||| || | Sbjct 1105 AATGAACCCTACAAAGGCAATTTTGGCCAATTGATGTCTCTCAAACAAGCCCGACCCGAT 1046 Query 29121 ATCAAAATTCTACCGTCCATAGGCGGCTGGACATTGTCCGA-CCCTTTTTATTTT--ATG 29177 | || ||||| || || || || || ||||| | | || || || || |||| | Sbjct 1045 TTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCTGATCCATTCTTCTTTTTCGTT 986 Query 29178 CACGACGCGGAGAAACGGCGCGTGTTTGTGGACTCGGTCGAGGAATTTTTGCAGGTGTGG 29237 || | | ||| | || |||||| | || ||| |||| ||| | ||| Sbjct 985 GACAAATCTAAGAGAACACG---ATTTGTGCAGTCAGTCAAGGAGTTTCTTTTAACATGG 929 Query 29238 AAATTTTTTGACGGCGTAGACATTGACTGGGAATTTCCGGGCGGTAAAGGCGCTAACCC- 29296 ||||| || || || || || || || ||||| || || || || |||||||||||||| Sbjct 928 AAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAAGGCGCTAACCCT 869 Query 29297 GACACTTGGCAACGGGGAGCGCGACGCCGACACGTATAACATTTTACTGAAGGAATTGCG 29356 ||| ||||| | | || || | || ||| | ||| |||| ||||| || Sbjct 868 GAC-CTTGGGA--GTCCAG-AAGATGGTGATTGTTATGTAAGTTTGATGAAAGAATTACG 813 Query 29357 CGCAATGCTGGATAAACTGCAATTGCAAACGGGTAAAACGTATGAATTGACAAGCGCAAT 29416 | ||||| ||| |||| | | | ||||| | || ||||| || || || Sbjct 812 TGAGATGCTCGATGAACTCTCAGCTAAGAATGGTAAGAAATACGAATTAACTTCTGCTAT 753 Query 29417 CAGCTCTGGCCACGACAAAATTGCTGTAGTGAAATACGACGTTGTGCAAAAATTTCTTGA 29476 ||| |||| || ||||| || || | ||| | | ||||| | | | || Sbjct 752 TAGCGCTGGGTGGGATAAAATCCAAGTTGTTGACTACAGCAAGGCTCAAAATTATATGGA 693 Query 29477 TAAAATATTTCTAATGAGTTACGATTTTAAAGGCGCATGGTCAAACACCGATTTGGGATA 29536 | | || || | ||||||||||| || ||||| || |||||||| | | ||| | Sbjct 692 TCATATTTTCTTGATGAGTTACGACTTCAAAGGTGCCTGGTCAAATGATACTCTTGGACA 633 Query 29537 TCAAACTACACTCTACGCACCGAGTTGGAATCCCAACGAGCTTTACAACACTGACCACGC 29596 |||||| || | ||||| || ||||| ||||| || ||||| ||||| || Sbjct 632 TCAAACACCATTGTACGCGCCTGCATGGAACCCCAAGGAAACTTACACTTCTGACTTCGG 573 Query 29597 CGTAAAGTCGCTCACTAAC-CAAGGCGTGGACCCGCGCAAAATTATTGTGGGCGTCGCCA 29655 ||||| | || || | || || ||| | || || ||| | || || || |||| Sbjct 572 AGTAAAAT-ACTTGTTAGCACAGGGAGTGAATCCTAAGAAGATTGTAGTAGGTGTTGCCA 514 Query 29656 TGTACGGCCGCGGTTGGACGGGCGTGACCGGTTACGTCGGTGACAACTAT---TTTAAAG 29712 |||| || || |||||||| || || | ||| || |||||| || || | || Sbjct 513 TGTATGGTCGTGGTTGGACTGGAGTTCATGATTA---CGAAGACAACAATCCCTTCACAG 457 Query 29713 GCACAGCTGCCGGGCCCGTGACCGGCACTTGGGATGACGGAGTTGTCGACTA 29764 ||| ||| | || || || | || |||||| | |||||||| |||||||| Sbjct 456 GCAACGCTACTGGACCTGTCAAGGGTACTTGGCAAGACGGAGTGGTCGACTA 405 >seq75004 Length=1229 Score = 179 bits (198), Expect = 3e-40 Identities = 351/515 (68%), Gaps = 29/515 (6%) Strand=Plus/Plus Query 33427 TCCTCGGCCTGCTGCAGCCAGTCCAGGAAGGGCTGCGCGCGGCGCCGCACGTCCGCCATC 33486 || ||||| ||| | ||||| || ||||||||||||||||| ||| |||| || |||| | Sbjct 234 TCGTCGGCTTGCCGTAGCCACTCGAGGAAGGGCTGCGCGCGCCGCAGCACATCGGCCACC 293 Query 33487 TCCTCGCGGCTT-AGCGC---TTTGCGGGACGGCTTGTAAAACCACTCCACGATCGCTTT 33542 |||| ||| |||| ||||| || |||||| ||| || | | ||| Sbjct 294 ACCTC----CTTGGGCGCGTACTTGCGCGAGGGCTTGGCGGCCCAGTCGAGCACAGCTCG 349 Query 33543 CTTTTCCACCACGTTCAAGTCGTACAGCAGCTTGAACGCGCCGGCCACTTTGGGCAGCAG 33602 || ||||| | || | |||||| ||||| |||| |||| ||| || ||||||||||| Sbjct 350 CTCGTCCACGATGTCGAGGTCGTAAAGCAGTTTGAGCGCGGCGGGCAGCTTGGGCAGCAG 409 Query 33603 CGCCTGGTCCAAAACGCAcagcgcggtg---------agcgcggcccgctgcgcgcgcag 33653 ||| | || | |||||| ||| |||||||| || ||||||| Sbjct 410 CGCGGGCTCGGCGGCTGCCAGCGCCGTGAGCGCGTGCAGCGCGGCGCGGGGCGCGCGGGC 469 Query 33654 atcgccgcgcgtaaactgcagcagcagcgcgcggtacttgcgcACGTCCCCGGCGAACGC 33713 || |||| || || |||||||| ||||||| ||| ||||| |||||| || Sbjct 470 GTCTGCGCGAGTCAAGCGCAGCAGCGTGGCGCGGTGGCGGCGTACGTCGGCGGCGAGCGT 529 Query 33714 CGCCGGCCTCACCAGCACCTCGAACAGCACCAGCGGCGCCTTCGACTTCACCTCCAGTCG 33773 ||| ||||||||||||||| ||| |||||||| || | ||| ||||| || Sbjct 530 GCGTGGCGCCACCAGCACCTCGAAAGCCACAAGCGGCGCATTGGCGCGCACGTCCAGGCG 589 Query 33774 TTCGGCCTCGTGCAGCAGCTCGGTGGCGATTGTAGCCTGCGAGACGTCGCAAGTGGCGTG 33833 | |||||||||||||| |||| |||| | | | ||| |||| | ||| | Sbjct 590 TGTGGCCTCGTGCAGCACGTCGGCGGCGCT----GACGGCG----CCCGCATCT-GCGCG 640 Query 33834 CTTTTGCTTGATAAACGCATGAAACATCTTAATGCGCTGCTTTTCGTTCTTTTTTAGGTC 33893 | ||||| | |||| | ||||| | ||||||||||| |||||||| | ||| Sbjct 641 C---TGCTTCAGGAACGAGTAGAACATGTCCATGCGCTGCTTCTCGTTCTTCTCGCTGTC 697 Query 33894 TTCATTCAGCGTCATCGACTTGACGCCCTCCGTCA 33928 || ||||||||| |||| |||||||||||| Sbjct 698 CTCGGACAGCGTCATGCTCTTGGCGCCCTCCGTCA 732 >seq53481 Length=216 Score = 113 bits (124), Expect = 4e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 34201 GCCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGA 34260 || || ||||| ||||||||||| || || |||||||| ||| | | | ||| || Sbjct 43 GCAGGGGGGTTCTTCAGTATGAAAGTATTCAGCTTATGGTTGAACTCCAAGGGGCCATGG 102 Query 34261 TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCA 34320 || ||||| || |||||||| || |||| ||||| || | |||||| || |||||| Sbjct 103 TACCCGCACGCCTTGCAGCCTTGCGAGATGGTGTTCCGCTTCGTGGACACTATCAGCTCA 162 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA 34367 ||||| |||||||| || || || || | || ||||||||||| || Sbjct 163 GTCTCGGGGTTGTCGCACTCGGGGCAGAGGACGAACTTGCGGATAAA 209 >seq55701 Length=1651 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 110264 AGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323 ||||| | |||||||| || || ||||| |||||||| |||||||| || | ||| | Sbjct 533 AGATTCATCATGCAAATCTTCGTAAAAACCTTAACCGGGAAAACCATCACATTGGAAGTG 474 Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 || || ||||| ||| | ||||| |||||| |||||||| ||| | || Sbjct 473 GAAGCTTCTGATACAATCGAGAACGTAAAGGCAAAGATTCAGGACAAAGAGGGCATTCCT 414 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 |||||||||||||| |||| || || || || || || |||| | ||| || | Sbjct 413 CCAGATCAACAAAGACTAATTTTCGCCGGAAAGCAACTAGAAGATGGGCGTACATTGTCA 354 Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || ||||| || ||||| || |||||| | ||| Sbjct 353 GACTATAATATTCAGAAGGAATCAACTTTGCACTTAGTG 315 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||| || || | || ||||| || ||||| | ||| ||| || Sbjct 297 AATGCAAATTTTTGTAAAGACACTTACAGGCAAGACTATTACTTTGGAAGTGGAAGCTTC 238 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | || || ||| ||| || ||||| ||| | ||| ||||| Sbjct 237 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 178 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||||||||||||| ||| || || ||||| || |||| | || | | || ||||| Sbjct 177 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACTCTATCTGACTACAA 118 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||||||||| |||||| |||| || | ||| |||| || Sbjct 117 TATTCAGAAAGAATCTACTTTGCACCTGGTACTACGTCTGAGAGGTGG 70 >seq54613 Length=3623 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||||| || ||||||||||| | || || ||||||||||| | ||| || || Sbjct 2440 AAAATGCAGATTTTTGTCAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAAGCT 2499 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||||||| | | | |||||| || ||| ||||| |||||| | || ||| Sbjct 2500 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 2559 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 |||||| | | |||| ||| || || || | || |||| | | ||| | | || ||| Sbjct 2560 CAACAACGTTTGATTTTTGCTGGAAAGCAATTAGAAGATGGCCGTACACTTTCTGACTAC 2619 Query 110450 AACATTCAAAAAGAATCTAC 110469 ||||| ||||| || ||||| Sbjct 2620 AACATCCAAAAGGAGTCTAC 2639 >seq2515 Length=4501 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGG-AGCCTG 110330 ||||||||| || ||||| || | || || |||||||||||| | || || ||||| Sbjct 3466 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTTGAGGTGGAAGCCT- 3524 Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390 |||||| | | | |||||| ||||| || || ||||| | || || | Sbjct 3525 CTGATACTATTGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTATTCCACCAGACC 3584 Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450 | ||| || | || | ||| ||||| ||||| || |||| | ||| || | ||||| | Sbjct 3585 AGCAACGATTGATCTTTGCTGGTAAGCAGCTAGAAGATGGACGTACATTGTCTGATTATA 3644 Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 |||||||||| ||||| || ||||| | ||| | |||| || || || || Sbjct 3645 ACATTCAAAAGGAATCCACATTGCATCTTGTGCTGCGACTTCGCGGAGGTAA 3696 >seq37844 Length=1442 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| || || | || || ||||| || || | ||| || ||| Sbjct 58 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACAATCACATTAGAAGTTGAACCTTCG 117 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| | | | || ||| ||||| |||||||| || | || || ||| Sbjct 118 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCTCCAGACCAA 177 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || |||| || ||||| ||||||||||||| | || | || || ||||| Sbjct 178 CAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGTCGTACTCTCGCCGACTACAAT 237 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| ||||| |||||| |||| || | || ||||| || Sbjct 238 ATTCAGAAAGAGTCTACTTTGCACTTGGTATTGCGTCTCCGAGGAGG 284 >seq54614 Length=296 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 |||||||| || | || || |||||| | || |||| ||| ||||| ||||||||| Sbjct 239 GACAAAGAGGGTATTCCTCCAGACCAACAACGTCTAATTTTTGCTGGTAAGCAGCTGGAG 180 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| | || | || || ||||| ||||| ||||| ||||| |||||| |||| || Sbjct 179 GATGGTCGTACGCTCGCCGACTACAATATTCAGAAAGAGTCTACTTTGCACTTGGTATTG 120 Query 110486 AGACTGCGAGGGGG 110499 | || ||||| || Sbjct 119 CGTCTCCGAGGAGG 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411051686668313