Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq121238 277 1e-69 seq54613 152 4e-32 seq2515 136 3e-27 seq55701 127 2e-24 seq37844 120 2e-22 seq32923 107 1e-18 seq54614 98.7 8e-16 >seq121238 Length=2101 Score = 277 bits (306), Expect = 1e-69 Identities = 662/987 (67%), Gaps = 23/987 (2%) Strand=Plus/Minus Query 45091 ACCACTGACAAAACTGTCGCCGCTTATTTCGTTGAATGGGGAGTGTATGGGCGCAATTTT 45150 ||| ||| ||| ||| | ||||||||||| |||||||| || ||| | || || Sbjct 1378 ACCTCTGGAAAAGTTGTGGGTGCTTATTTCGTAGAATGGGGTGTTTATCCTAGGAAATTC 1319 Query 45151 CCTATGAACCGCGTGCCAGTGCCGAACCTTACGCATTTGTTATACGGTTTTATTCCTATA 45210 ||| || | || | || | || || ||||| ||| | | ||||| || ||||| || Sbjct 1318 CCTGTGGATCGTATACCTATACCTAATCTTACTCATCTACTCTACGGCTTCATTCCAATT 1259 Query 45211 TGCGGTGGCGATGGCATTAATGACAGTCTTAAAAC-GATTACAGGCAGTTTTGAAGCGTT 45269 ||||| || || || || |||||||| ||||||| ||| ||||||||| |||| || Sbjct 1258 TGCGGCGGTGACGGTATCAATGACAG-CTTAAAAGAGATCGAAGGCAGTTTCCAAGCATT 1200 Query 45270 GCAAAAATCGTGCGCCGGCCGCTCAGATTTCAAAGTGAGCATTCACGACCCATGGGCCGC 45329 || ||| || ||||||| ||||||||||| || || || |||||||| || Sbjct 1199 ACAGCGATCTTGTAGCGGCCGCGAGGATTTCAAAGTCTCAATCCATGATCCATGGGCAGC 1140 Query 45330 TGTGCAAAAACCACAAAAAGGCGTTTCTGCTTGGAACGAACCGTATAAAGGCAATTTTGG 45389 | ||||||||||||| ||| | ||| | ||||| ||||| || |||||||||||||| Sbjct 1139 ATTACAAAAACCACAAAGAGGATTGTCTTCATGGAATGAACCCTACAAAGGCAATTTTGG 1080 Query 45390 ACAAATCATGGCTGTAAAACGGGCAAATCCTCATTTAAAAGTGTTGCCATCGATTGGCGG 45449 ||| | ||| || | |||| || || |||| || | | || || ||||| || Sbjct 1079 CCAATTGATGTCTCTCAAACAAGCCCGACCCGATTTGAAGATTCTTCCCTCTATTGGTGG 1020 Query 45450 CTGGACGCTGTCCGATCCGTTTTACCATT---TGCACGATGCGGAGA-AACGCGCTTTGT 45505 |||||||| | ||||| || | | || | || | | ||| ||| || | Sbjct 1019 GTGGACGCTTGCTGATCCATTCTTCTTTTTCGTTGACAAATCTAAGAGAACACG----AT 964 Query 45506 TTGTGGAATCCGTGCGCGAATTTTTAACTACGTGGAAATTTTTTGACGGAGTCGATATAG 45565 ||||| | || || || ||| | || |||||||| || || || || ||||| | Sbjct 963 TTGTGCAGTCAGTCAAGGAGTTTCTTTTAACATGGAAATTCTTCGATGGTGTTGATATCG 904 Query 45566 ATTGGGAGTTTCCCGGCGGCAATGGCGCCAATCC-ATCGGTGGGCGATCCAGAACGCGAC 45624 |||||||||| || || ||||| ||||| || || | |||| | ||||||| || Sbjct 903 ATTGGGAGTTCCCTGGTGGCAAAGGCGCTAACCCTGACCTTGGGAG-TCCAGAA---GAT 848 Query 45625 GGTCTCACTTATGTAGCACTGCTGCGCGATTTGCGCGACATGCTCGATCAATTGGCGCA- 45683 ||| ||||||| || || || || || || ||||||||| || | | || Sbjct 847 GGTGATTGTTATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAACT--CTCAG 790 Query 45684 CGAA-ACCGGTCGGCGCTACGAACTGACTACGGCTATAAGCGCCGGTGACGACAAAATCG 45742 | || | ||| | |||||| | ||| | ||||| ||||| || || |||||| Sbjct 789 CTAAGAATGGTAAGAAATACGAATTAACTTCTGCTATTAGCGCTGGGTGGGATAAAATCC 730 Query 45743 CTTTGGTAGATT--ATCAAGACGCGCAAACTTATCTCGATCGAATCTTTTTAATGACGTA 45800 | || || | | |||| || |||| |||| | |||| || || || |||| || Sbjct 729 AAGTTGTTGACTACAGCAAG--GCTCAAAATTATATGGATCATATTTTCTTGATGAGTTA 672 Query 45801 TGATTTTAAAGGCGCTTGGTCGAACTCGGATTTGGGCCATCAAACGGCCGTGTACGCGCC 45860 || || ||||| || ||||| || | | || |||||||| | |||||||||| Sbjct 671 CGACTTCAAAGGTGCCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCC 612 Query 45861 AGAATGGAATCGCGACGAGCGTTACACAGTCGACTACGCGGTGCACGTTTTGCTCGAAAA 45920 | |||||| | | | || |||||| |||| || || | ||| | | | | Sbjct 611 TGCATGGAACCCCAAGGAAACTTACACTTCTGACTTCGGAGTAAAATACTTGTTAGCACA 552 Query 45921 ACGGGTAAAGCCTCAAAAAATCGTGCTCGGCGTGGCAATGTACGGTCGCGGCTGGACCGG 45980 | || || ||| | || || || | || || || ||||| ||||| || ||||| || Sbjct 551 GGGAGTGAATCCTAAGAAGATTGTAGTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGG 492 Query 45981 AGTAATTAACTATCAAGACGACAACCCGTTTACCGGCATCGCAACCGGGCCCGTGTCCGG 46040 ||| | | || ||||| |||| || || || |||| ||| || || || || || Sbjct 491 AGTTCATGATTACGAAGACAACAATCCCTTCACAGGCAACGCTACTGGACCTGTCAAGGG 432 Query 46041 CACTTGGGAAGACGGTGTGATCGATTA 46067 |||||| ||||||| ||| |||| || Sbjct 431 TACTTGGCAAGACGGAGTGGTCGACTA 405 >seq54613 Length=3623 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || |||||| |||| |||||| ||||||||||||||||| ||||| || | Sbjct 3572 CCTCCTCGCAGACGCAGTACCAGATGAAGGGTGGATTCTTTTTGAATATTATAGTCAGAT 3513 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || | ||| || |||||| | || | | |||||||| || || Sbjct 3512 AGTGTGCGACCATCTTCTAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 3453 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | ||| ||| ||| |||| | || ||||| ||| ||| Sbjct 3452 ATACCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATTGTATCAGAGGCTTCAACT 3393 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| || || | || || ||||| |||||||| Sbjct 3392 TCTAAAGTGATTGTTTTCCCTGTAAGTGTCTTTACAAAGATCTGCAT 3346 Score = 140 bits (154), Expect = 2e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || | |||||| || || || ||||| ||||| || || | | Sbjct 2669 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAA 2610 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | ||| || |||||| | ||||| | ||| ||||| || ||| Sbjct 2609 AGTGTACGGCCATCTTCTAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2550 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| |||||| | ||| ||| |||| | ||| || ||| ||| || Sbjct 2549 ATGCCTTCCTTGTCTTG-AATTTTGGCTTTTACATTTTCAATAGTATCGGAAGCTTCAAC 2491 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| | ||| || ||||| || || | ||||| ||||| ||||||||||| Sbjct 2490 TTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTGACAAAAATCTGCATTTT 2440 Score = 116 bits (128), Expect = 3e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 29593 GATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCA 29652 |||||||||||||| || || || | | |||||| ||| || | ||| || |||||| Sbjct 3080 GATTCTTTTTGAATATTGTAGTCAGATAGTGTGCGACCATCTTCTAATTGCTTACCAGCA 3021 Query 29653 TATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACA 29712 | || | | |||||||| || || || |||||||||||||| | ||| ||| ||| Sbjct 3020 AAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACA 2961 Query 29713 GTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTA 29772 |||| | || ||||| ||| ||||| | ||| || ||||| ||||| | || || Sbjct 2960 TTTTCAATTGTATCAGAGGCTTCAACTTCTAAAGTGATTGTTTTCCCAGTGAGTGTCTTT 2901 Query 29773 ACAAATATCTGCAT 29786 ||||| |||||||| Sbjct 2900 ACAAAGATCTGCAT 2887 Score = 102 bits (112), Expect = 6e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || ||| || || || ||||| ||||| || ||||| ||||| || |||| Sbjct 3344 CCTCCTCGCAGACGGAGTACTAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCCGAT 3285 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || ||| || ||||| ||||| || | || | | || ||||| || ||| Sbjct 3284 AAGGTACGGCCATCTTCCAGTTGCTTGCCTGCGAAGATAAGACGCTGTTGATCTGGAGGA 3225 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| |||||||| | || || ||| |||| | |||||||| ||||| Sbjct 3224 ATACCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCAATGGTGTCAGATGCCTCTACC 3165 Query 29740 TCAAGAGTTATAGT 29753 || ||||| ||||| Sbjct 3164 TCCAGAGTAATAGT 3151 >seq2515 Length=4501 Score = 136 bits (150), Expect = 3e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGA 29630 |||||||| | ||| | |||||||| ||||||||||||||||| | |||| || || Sbjct 3681 CGCAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTATAATCAGACAAT-GTACGTCC 3623 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | ||||||| |||||| || || |||||||| || || Sbjct 3622 ATCTTCTAGCTGCTTACCAGCAAAGATCAATCGTTGCTGGTCTGGTGGAATACCTTCCTT 3563 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | || ||| ||| |||| | ||| ||||| ||| || ||||| || || Sbjct 3562 ATCTTGGATCTTAGCTTTTACATTTTCAATAGTATCAGAGGCTTCCACCTCAAGGGTAAT 3503 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| || || | ||| || || || || |||||| Sbjct 3502 GGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 3466 >seq55701 Length=1651 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| ||| || |||| || | || |||||||| ||||| || || || | Sbjct 70 CCACCTCTCAGACGTAGTACCAGGTGCAAAGTAGATTCTTTCTGAATATTGTAGTCAGAT 129 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || || |||||| | || | |||||||||||| || ||| Sbjct 130 AGAGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 189 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||| || || |||||| | || ||| |||| | || |||||| ||| || Sbjct 190 ATGCCCTCTTTATCCTG-AATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCAC 248 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| | ||| ||||| ||||| || | || || ||||| || |||||| Sbjct 249 TTCCAAAGTAATAGTCTTGCCTGTAAGTGTCTTTACAAAAATTTGCATT 297 Score = 122 bits (134), Expect = 7e-23 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG- 29617 ||| ||||| | |||||||| || || | || ||||| || ||||| ||||| || | Sbjct 297 TCCACCCCTAAGGCGCAGCACTAAGTGCAAAGTTGATTCCTTCTGAATATTATAGTCTGA 356 Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677 ||||| | || ||| || ||||| || || || | || | |||||| ||||| || | Sbjct 357 CAATG-TACGCCCATCTTCTAGTTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAG 415 Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 |||| ||||||||||| || ||| |||| || || | || | || |||||| ||| Sbjct 416 GAATGCCCTCTTTGTCCTG-AATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCC 474 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| | || || ||||| || ||||||||||| || || || ||||| Sbjct 475 ACTTCCAATGTGATGGTTTTCCCGGTTAAGGTTTTTACGAAGATTTGCAT 524 >seq37844 Length=1442 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| ||||| || || || |||||||| ||||| || || | | |||||| Sbjct 501 ACGAAGCACTAAATGCAGAGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGGCC 442 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| ||||| || | || | | || ||||| || ||||||||||| || Sbjct 441 ATCTTCTAGTTGCTTGCCTGCGAAGATAAGACGCTGTTGATCTGGGGGAATACCCTCCTT 382 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || || ||| |||| | |||||| | | || || || | ||| || Sbjct 381 GTCTTGGATCTTAGCCTTAACATTTTCAATAGTGTCGGCTGGCTCCACCTCTAAAGTAAT 322 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| | || |||||||| |||||||| Sbjct 321 GGTTTTCCCAGTAAGTGTCTTAACAAAAATCTGCAT 286 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| ||||| || | || || ||||| ||||| || || || || Sbjct 284 CCTCCTCGGAGACGCAATACCAAGTGCAAAGTAGACTCTTTCTGAATATTGTAGTCGGCG 225 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || || || || ||||| | || | | ||| || || || ||| Sbjct 224 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGGTCTGGAGGA 165 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | || ||| ||| |||| | |||||| ||| |||| ||| Sbjct 164 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCCGAAGGTTCAACT 105 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||| || || | || || ||||| |||||||| Sbjct 104 TCTAATGTGATTGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 58 >seq32923 Length=5192 Score = 107 bits (118), Expect = 1e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 89727 GCAACTGGCCTTGCGCTTTGAAACAAAAACCTGAGCAGTTGGCGGATGCCGGtttttttt 89786 || |||||||| || |||||| || || || ||| | | || || || || || || | Sbjct 1725 GCGACTGGCCTCGCAGTTTGAAGCAGAAGCCCGAGGAACTCGCCGAAGCGGGATTCTTCT 1666 Query 89787 ACACGGGCCAAGGCGACAAGACGATTTGTTTCTTTTGCAACGGGGGCCTTAAGGATTGGG 89846 |||| ||||| |||||||| || | || |||| || |||| ||||| ||||| |||| Sbjct 1665 ACACCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGCCTCAAGGACTGGG 1606 Query 89847 AAGATGGCGATGAACCTTGGGAACAACATGCGCGCTGGTTTGATAATTGCATCTATGTTC 89906 | | | ||| | || ||||| || || ||||||||||| || ||| ||| |||| Sbjct 1605 AGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTTC 1546 Query 89907 AACTAGTAAAAGGACGCGATTACGTGCAAAATGTTAT 89943 | || || || || || || || || || || || || Sbjct 1545 AGCTGGTCAAGGGCCGAGAGTATGTCCAGAAGGTGAT 1509 >seq54614 Length=296 Score = 98.7 bits (108), Expect = 8e-16 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| ||||| || | || || ||||| ||||| || || || || Sbjct 106 CCTCCTCGGAGACGCAATACCAAGTGCAAAGTAGACTCTTTCTGAATATTGTAGTCGGCG 165 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || || || || |||||| | || | | ||| || || || ||| Sbjct 166 AGCGTACGACCATCCTCCAGCTGCTTACCAGCAAAAATTAGACGTTGTTGGTCTGGAGGA 225 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | || ||| ||| |||| | |||||| ||| |||| ||| Sbjct 226 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAAGGTTCAACT 285 Query 29740 TC 29741 || Sbjct 286 TC 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383549046164481