Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq143025 93.3 5e-14 >seq143025 Length=4707 Score = 93.3 bits (102), Expect = 5e-14 Identities = 144/199 (72%), Gaps = 10/199 (5%) Strand=Plus/Plus Query 192922 TAAAAACGGAAACAGTATCTCATACATTAAATTATCCACAAAAACCCCTTGTTACCACA- 192980 ||| || ||| ||| | ||||| | | |||||||||| || ||||| || || ||| Sbjct 1691 TAAGAATGGATACATTGGCTCATGTACTCTATTATCCACACAAGCCCCTGGTGACAACAA 1750 Query 192981 GATAT-TGCAAAATTTAATAAATTAGACGATTATCCAAATGGTATTAATGCTATTGTTGC 193039 ||| | || || ||||| ||||| || | || |||||||||| |||||||||| Sbjct 1751 GATCTATGGAATATTTACGGT-TTAGA-GAGTTGCCTGCTGGTATTAATTCTATTGTTGC 1808 Query 193040 TATAGCTTGCTATACTGGTTATAATCAAGAAGACAGTATTATTTTAAATAAAGCTT---C 193096 || || || ||||| || ||||||||||| ||| | ||||| ||| |||| | Sbjct 1809 AATTTTATGTTACACTGGATACAATCAAGAAGATAGTGTCATTTTGAAT---GCTTCAGC 1865 Query 193097 TATTGAAAGAGGATTATTT 193115 | ||||||||||||| ||| Sbjct 1866 TGTTGAAAGAGGATTCTTT 1884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632353116067480