Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq143025 89.7 6e-13 >seq143025 Length=4707 Score = 89.7 bits (98), Expect = 6e-13 Identities = 173/247 (70%), Gaps = 19/247 (8%) Strand=Plus/Plus Query 192433 CTATGGTTAAACAAGCCATTGGGTTTATTCCTTGCCACAACTT------AAAAACGGAAA 192486 |||||| ||||||||| || |||| | | | || | | |||| || || ||| | Sbjct 1646 CTATGGGTAAACAAGCTAT-GGGTGTCTACATTACTA--ACTTTCATGTAAGAATGGATA 1702 Query 192487 CAGTCTCTCATACATTAAATTATCCACAAAAACCACTTGTTACCACA-GATAT-TGCAAA 192544 || | ||||| | | |||||||||| || || || || || ||| ||| | || || Sbjct 1703 CATTGGCTCATGTACTCTATTATCCACACAAGCCCCTGGTGACAACAAGATCTATGGAAT 1762 Query 192545 ATTTAATAAATTAGACGATTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTA 192604 ||||| ||||| || | || |||||||||| |||||||||| || || || Sbjct 1763 ATTTACGGT-TTAGA-GAGTTGCCTGCTGGTATTAATTCTATTGTTGCAATTTTATGTTA 1820 Query 192605 TACTGGCTATAACCAAGAAGACAGTATTATTTTAAATAAAGCTTC---TATTGAAAGAGG 192661 ||||| || || |||||||| ||| | ||||| ||| ||||| | |||||||||| Sbjct 1821 CACTGGATACAATCAAGAAGATAGTGTCATTTTGAAT---GCTTCAGCTGTTGAAAGAGG 1877 Query 192662 ATTATTT 192668 ||| ||| Sbjct 1878 ATTCTTT 1884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625736271029760