Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq102275 111 5e-21 seq11325 111 5e-21 seq223119 105 2e-19 seq161776 105 2e-19 seq46333 104 7e-19 seq11714 104 7e-19 seq74069 102 3e-18 seq307702 100 9e-18 seq129341 100 9e-18 seq19372 100 9e-18 seq216949 98.7 3e-17 seq206906 98.7 3e-17 seq193506 98.7 3e-17 seq157605 98.7 3e-17 seq127868 98.7 3e-17 seq11713 98.7 3e-17 >seq102275 Length=3780 Score = 111 bits (122), Expect = 5e-21 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 576 TATGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 635 Query 2825 AACCCCGGGCTTCAGC 2840 || |||||| ||| || Sbjct 636 AATCCCGGGTTTCGGC 651 >seq11325 Length=3477 Score = 111 bits (122), Expect = 5e-21 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2908 TATGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 2849 Query 2825 AACCCCGGGCTTCAGC 2840 || |||||| ||| || Sbjct 2848 AATCCCGGGTTTCGGC 2833 >seq223119 Length=764 Score = 105 bits (116), Expect = 2e-19 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 305 TATGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 246 Query 2825 AACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 245 GATCCCGGGTTTCGGC 230 >seq161776 Length=2193 Score = 105 bits (116), Expect = 2e-19 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 |||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1239 TATGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 1180 Query 2825 AACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 1179 GATCCCGGGTTTCGGC 1164 >seq46333 Length=5232 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct 4988 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTGAATC 4929 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 4928 CCGGGTTTCAGC 4917 >seq11714 Length=2369 Score = 104 bits (114), Expect = 7e-19 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 ||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 225 ATGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 284 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 285 ATCCCGGGTTTCGGC 299 >seq74069 Length=4440 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 4046 TATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 3987 Query 2825 AACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 3986 GATCCCGGGTTTCGGC 3971 >seq307702 Length=1562 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 843 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 784 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 783 ATCCCGGGTTTCGGC 769 >seq129341 Length=2537 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 493 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 434 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 433 ATCCCGGGTTTCGGC 419 >seq19372 Length=5164 Score = 100 bits (110), Expect = 9e-18 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || || || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1242 TTCATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGT 1183 Query 2823 TCAACCCCGGGCTTCAGC 2840 || | |||||| ||| || Sbjct 1182 TCGATCCCGGGTTTCGGC 1165 >seq216949 Length=1413 Score = 98.7 bits (108), Expect = 3e-17 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct 1266 GAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTGAATCCCG 1207 Query 2832 GGCTTCAGC 2840 || ||| || Sbjct 1206 GGTTTCGGC 1198 >seq206906 Length=662 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 256 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 315 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 316 CCGGGTTTCGGC 327 >seq193506 Length=673 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 450 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 391 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 390 CCGGGTTTCGGC 379 >seq157605 Length=1917 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1492 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1433 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1432 CCGGGTTTCGGC 1421 >seq127868 Length=964 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 248 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 307 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 308 CCGGGTTTCGGC 319 >seq11713 Length=2489 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2257 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2198 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2197 CCGGGTTTCGGC 2186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15787930518945