Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq32923 134 1e-26 seq54613 107 2e-18 >seq32923 Length=5192 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 99911 GATTGGCCGCTCAGTTTGAAACAAAAACCAGAGCAATTGGCCGAAGCCGGTTTTTATTAC 99970 || ||||| | ||||||||| || || || ||| || | |||||||| || || | ||| Sbjct 1723 GACTGGCCTCGCAGTTTGAAGCAGAAGCCCGAGGAACTCGCCGAAGCGGGATTCTTCTAC 1664 Query 99971 ACCGGCAAAGGTGACAAAGTTAAATGTTTTCATTGCGACGGCGGCCTCAAAGACTGGGAA 100030 |||||| | || |||||| ||| || || | || |||||||||||||| |||||||| Sbjct 1663 ACCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGCCTCAAGGACTGGGAG 1604 Query 100031 AGCACCGACGAGCCGTGGCATGAACACGCACGTTGGTTTGATCGCTGCACATACGTGCGG 100090 | | ||||| ||||||| | | ||||| || ||||| || || ||| | ||||| | | Sbjct 1603 AACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTTCAG 1544 Query 100091 CTTGTAAAGGGTTACGACTACGTGCAGCGCGTGCTTAGCGAAGCGTGCG 100139 || || ||||| || || || ||| ||| | | || ||||||| Sbjct 1543 CTGGTCAAGGGCCGAGAGTATGTCCAGAAGGTGATCACAGAGGCGTGCG 1495 >seq54613 Length=3623 Score = 107 bits (118), Expect = 2e-18 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||||| |||||||| |||||| | || || || |||||||| ||||| ||| | Sbjct 2440 AAAATGCAGATTTTTGTCAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAAGCT 2499 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 |||| || ||| | || ||| |||||| ||||| |||||| | || ||| Sbjct 2500 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 2559 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATT 106434 |||||| | | |||| ||| || || |||||||||||| | | ||| | || | Sbjct 2560 CAACAACGTTTGATTTTTGCTGGAAAGCAATTAGAAGATGGCCGTACACTTT--CTGACT 2617 Query 106435 ACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||||| ||||| || ||||| || ||| ||||| || | | ||||| || Sbjct 2618 ACAACATCCAAAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGG 2669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 400585262426528