Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4529 134 2e-25 seq77336 105 1e-16 >seq4529 Length=1986 Score = 134 bits (148), Expect = 2e-25 Identities = 172/234 (74%), Gaps = 10/234 (4%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 || ||||| |||||||| || || ||||| |||| | ||| |||| |||| | Sbjct 764 ATTTACAAAGTGCTCAAACAAGTCCACCCGGACACCGGT-----ATC-TCCAGCAAGGCG 817 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| |||||||||||||| || |||||||| |||| ||||||| | ||||||| || Sbjct 818 ATGTCCATCATGAACTCGTTCGTGAACGACATCTTCGAGCGCATCGCCGCCGAGGC--GT 875 Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 ||| || || | || ||||||| | ||||||| | | | ||| | |||||| ||| Sbjct 876 CGCGACTCGCCCACTACAACAAGAGGTCCACGATCACCTCCAGGGAGGTGCAGACCTCCG 935 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | || | ||| ||| || |||||| |||||||||| ||| ||||||| Sbjct 936 TGAGGCTCCTGTTGCCCGGTGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 989 >seq77336 Length=4191 Score = 105 bits (116), Expect = 1e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| ||||| |||||||||||||| |||| || ||| || | ||| | Sbjct 319 ATCTACAAAGTGCTGAAGCAGGTGCACCCGGACACCG---GG--ATC-TCGAGTAAGGCA 266 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| || ||||| || |||||||||||||| | || || |||| ||||||| Sbjct 265 ATGTCTATAATGAATTCCTTTGTCAACGACATTTTTGAACGTATCGCGGCCGAGGCGTCC 206 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||||| || ||| ||| | |||||| || | || | |||||| |||| Sbjct 205 CGTCTGGCGCACTACAATAAGAGGTCAACGATCACGTCGAGGGAAGTGCAGACCTCCGTC 146 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||||| || | | |||||| || || | |||||| ||| ||| || || Sbjct 145 CGCCTCCTCCTTCCCGGCGAGCTCGCGAAGCACGCAGTCAGCGAAGGGAC 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7143499326698042