Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq7548 549 3e-151 seq139650 93.3 6e-14 seq105385 87.8 2e-12 >seq7548 Length=2633 Score = 549 bits (608), Expect = 3e-151 Identities = 1102/1613 (68%), Gaps = 27/1613 (2%) Strand=Plus/Minus Query 68356 ATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAG 68415 |||||| | || || | || ||||| || | | ||| |||||||| |||| ||| Sbjct 2257 ATTTTACCTTTGTCTACGGTGAACTGTATAGCATTTGCTGCCGGTTTTGTGCGTAAGTAG 2198 Query 68416 TACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAA 68475 ||||| || ||||| | || | |||| ||| |||||| || |||||||| | Sbjct 2197 TACATTCCTGTTTTTAAGCCCATTTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 2138 Query 68476 TAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTA 68535 || | || | || | ||| || || | ||||||||||| || ||||||||||||||| Sbjct 2137 TAGTTAGGCTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATGAAAGCTCCTCTA 2078 Query 68536 TCTGCCGCCATTTTTATAATACTCTTTTGAGGAATT-TCCCAAATAGTCTT--AAAAATC 68592 || |||||||||| ||| || ||| | ||| | ||||| | || || | ||||| Sbjct 2077 TCAGCCGCCATTTGTATGG-ACGTTTTCAATGAAATCTCCCATACGGTTTTGTACAAATC 2019 Query 68593 TGTTTGATATCATCTGGAAGGCTCGTATTTT---GAATGGATCCACCATCGGATATAATT 68649 | || || || | |||| | | ||| | || ||||| | | ||| ||| Sbjct 2018 TCTT--ATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCGTTGTTGTATAAAATA 1961 Query 68650 ATATTCTTGATCTCATCATTCCACAATTTT-CTCTCCGTTAAAACTCTAAGGAGATGCGG 68708 | ||| || || || |||| ||| || | |||| || ||| || | || || || | Sbjct 1960 AGATTTTTCATATCTTCATCCCATAAATCGGCTCTG-GTCAAATCTGTCAGAAGGTGATG 1902 Query 68709 ATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGG 68768 ||| |||| ||||||| |||||||| ||||| | |||||| || ||| | || Sbjct 1901 ATTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATGTTTGATGTAAAGGG 1842 Query 68769 TTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCAC 68828 ||| | ||| ||| | || || |||||||| || || || || ||||||||||| || | Sbjct 1841 TTCAAAAGACTCAGTGTTACCAAGAATTTGTGCTGTAGAGGCGGTTGGCATAGGAGCTAA 1782 Query 68829 CAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888 ||||| | ||| | | ||||||| || ||||| ||||| || ||| ||||| Sbjct 1781 CAATAGAGAATTGCGCAAACCATGTTTTGCTATTTTTTCTTTGAGGGCAGCCCAGTCCCA 1722 Query 68889 AAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA 68948 || || | || | ||| | ||| |||||||| || || | || || || Sbjct 1721 CAGTTCCGTAGGAGTTTTGTCCCACATATCATATTGTAGGATACCTTGGCT--CACTGGA 1664 Query 68949 -TCCATT-ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 ||| || ||| || || | ||||| | ||| |||| ||||||||| || |||||| Sbjct 1663 CTCCCTTCATAAGTACTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAAT 1604 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 ||||| |||||||| ||||| || || | | ||| || | ||||| ||| ||| Sbjct 1603 GCACCATAATAAATAGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCG 1544 Query 69067 AATGGATAATGTAAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGG 69125 | || || | | | | | ||||| |||||||| ||||||||| |||||||||||||| Sbjct 1543 TAAGG-TATTCTCATCAACACAAATGTATCTGCCATTCCCTGAACACCAATACCGATAGG 1485 Query 69126 TCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 69185 | || || |||||||| ||| ||||| || | ||||||| | |||| ||| || | Sbjct 1484 CCGGTGCTTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGAC 1425 Query 69186 TTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCG 69245 ||| || | |||| | || | ||| | || |||| ||| ||||| |||| | Sbjct 1424 TTTGTTTAAATTTTGAGTGACAATTTTTGTGATTTCTTTTAATTTTTTAAAATTAAATTG 1365 Query 69246 TCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCAT- 69304 || | ||||||||| || ||||||| || || ||||| || ||||| || |||| Sbjct 1364 CTTATGTTCAACAAACATGTTAAGTGCTATGGAAGCAAGATTGCATACTGCCACTTCATC 1305 Query 69305 -TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGA 69363 | | || ||||| | | ||| || || ||||| |||||||| ||||| || ||| Sbjct 1304 TTCTGAAGTG--TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGA 1247 Query 69364 TTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTT 69423 || | ||||||||||| ||||||| || ||||| || | || | || |||||||| Sbjct 1246 TTCTTTTGATTACTCTTCCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTC 1187 Query 69424 TCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACG-GTCTTGTA 69482 || | || | ||| ||||| || ||||| | || || | | | | || || || || Sbjct 1186 TCCACTTGGGCTTCTATAATTGACTTCCATA--ACTCTTG-AGCTCTGACTTGTTTTATA 1130 Query 69483 A--CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCA 69540 | || || ||||||||||||| | |||||| ||| || || ||||| | ||| Sbjct 1129 AATCGTTTTTCTTTTTCATATTTGGCATATAGTTCTTCAAACTCCTCTCCATAGCAGTCA 1070 Query 69541 TCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGT 69600 | | |||||||| |||| |||||||| | ||| || ||||| | | |||| | Sbjct 1069 GCGAGACCAGGACAGTCATGAGGACACATTAGACTCCAAACTTCATCCTTTTCTACTCTT 1010 Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660 |||||||| ||||| || ||||| | ||| ||| || ||||| | ||| ||||||| Sbjct 1009 TTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 950 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || ||||| || || | | ||| | ||||| | || || | |||||| || |||| Sbjct 949 TTACCTGTGTTCTTCCTTAAATCTAAGAACTCAAATATGTCTGCATGCCAAGGCTCTAAG 890 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || || || | | || || ||||| ||||| || ||||||| ||||||||||| || Sbjct 889 TAAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 830 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 ||||| ||||||| ||| || | | |||||| || ||||| || |||| |||||| Sbjct 829 TTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATATAA 770 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 || || | || | || || |||||| || || || |||||| ||| Sbjct 769 GAACCCTGGGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATT 710 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCAT 69953 | |||||| |||| || || ||| | || || || |||||||| ||| |||| Sbjct 709 AAAGCACATTGTTTTAAAGTATCAAAAATGCCTTCAATGCTATCGTCTTTCAT 657 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 ||||| ||||| || |||| |||||| |||||| |||||| || ||||||||||||||| Sbjct 209 TTATTGTTTATCTTTAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTAT 150 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244 ||| ||||| || |||| ||| |||| | | ||| ||||| | ||| Sbjct 149 TTAAAATCTCTGTCATAAACAATGGCAGAGTCCAATTTGTCCTTGTTTTT 100 >seq139650 Length=2376 Score = 93.3 bits (102), Expect = 6e-14 Identities = 99/129 (77%), Gaps = 4/129 (3%) Strand=Plus/Minus Query 162494 TTATGACCCC--TATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCATT 162551 ||||||| || ||||| |||||| |||| ||| | ||| | || ||| | | ||| | Sbjct 489 TTATGACTCCAGTATTA--CCTATGTTAGCTGAAGCTTGCAAGTCGGTTGAAATGGCTAT 432 Query 162552 TAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAAGT 162611 ||||||| |||| ||| |||||| | ||| | ||||||||||| ||||| || ||||| Sbjct 431 GAAAAAATGTCCAAATGGCATGTTTTCTGAAATAAAATATGATGGAGAACGGGTTCAAGT 372 Query 162612 TCATAAAAA 162620 |||||||| Sbjct 371 CCATAAAAA 363 >seq105385 Length=1203 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 70345 TTTTTTGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404 || || || || || |||||||| ||||| ||||||||||| || | ||||||||| ||| Sbjct 558 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATAGCATAATCA 617 Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTT 70464 ||||| | || || ||||||||| ||||| ||||| | |||| | || |||| Sbjct 618 GGATGATCAGTGGTCTTAGTAGCTGCAATTTCAGCAGCAAGATTATCAAGCTCAGCAGTT 677 Query 70465 GTAACTCCGTTATATA 70480 || || || ||||| Sbjct 678 GTTACACCAGAATATA 693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 683854279707240